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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58180.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  37/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.1.25
:193 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   61->174 3butA PDBj 2e-16 11.6 %
:RPS:SCOP  53->179 1xo8A  b.1.25.1 * 6e-22 16.7 %
:HMM:SCOP  31->183 1xo8A_ b.1.25.1 * 3.1e-31 33.3 %
:HMM:PFM   76->172 PF03168 * LEA_2 3.6e-22 29.9 97/101  
:BLT:SWISS 49->181 LEA14_SOYBN 8e-05 26.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58180.1 GT:GENE ABA58180.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1911981..1912562) GB:FROM 1911981 GB:TO 1912562 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA58180.1 GB:DB_XREF GI:76883499 LENGTH 193 SQ:AASEQ MKPGLTRSLNGKGGGWLPKIALIRKILASRLGVLALLSLALMACATLSNYERPRVYLTDFQFREASMLAQNFLLRLRIDNPNDAALSINGMEVSLNLNGHPLAQGLSNQSFSVPRFGSAEVEMQVTTTFINLVQQMLSLQGQRVLNYEIAGQLHLARALGFGRRVFPFQEKGVLDLKTMGNRDISFNYPPGRR GT:EXON 1|1-193:0| BL:SWS:NREP 1 BL:SWS:REP 49->181|LEA14_SOYBN|8e-05|26.6|124/100| TM:NTM 1 TM:REGION 26->47| SEG 27->48|lasrlgvlallslalmacatls| RP:PDB:NREP 1 RP:PDB:REP 61->174|3butA|2e-16|11.6|112/123| HM:PFM:NREP 1 HM:PFM:REP 76->172|PF03168|3.6e-22|29.9|97/101|LEA_2| RP:SCP:NREP 1 RP:SCP:REP 53->179|1xo8A|6e-22|16.7|126/151|b.1.25.1| HM:SCP:REP 31->183|1xo8A_|3.1e-31|33.3|150/0|b.1.25.1|1/1|LEA14-like| OP:NHOMO 45 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------111111-----111-------111---1------1-----------1----1----------------1---1-----------------------1--------------------------11-----1---------------------------1--2-------------------------------------------------------------------------------------------------------1----------------------------2-2222--111----21--------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 58.0 SQ:SECSTR ############################################################EEccccccEEEEEEEEEEEccccccEEEEEEEEEE#ETTEEEEEEEEcccEEEcTTcEEEEEEEEEEEHHHHTTHHHHHHHTT#cEEEEEEEEEEEEEccccEEcccEEEEEEE################### DISOP:02AL 1-5, 7-8, 191-193| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEcccEEEEEEEEEEEEEcccccccEEEEEEEEEEEccEEEEEcccccEEEEccccEEEEEEEEEEcHHHHHHHHHHccccccccEEEEEEEEEEcccccccEEEEEEEEEEEEccccccEEEEEEcccccc //