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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58189.1
DDBJ      :             two component transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  813/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->200 1yioA PDBj 6e-43 41.8 %
:RPS:PDB   1->58 2dvyD PDBj 3e-06 8.6 %
:RPS:PDB   29->190 3cwoX PDBj 4e-31 14.8 %
:RPS:SCOP  2->122 1a0oA  c.23.1.1 * 4e-19 27.3 %
:RPS:SCOP  138->202 1a04A1  a.4.6.2 * 8e-15 38.5 %
:HMM:SCOP  3->192 1s8nA_ c.23.1.1 * 5e-33 29.1 %
:RPS:PFM   8->118 PF00072 * Response_reg 3e-12 37.8 %
:RPS:PFM   143->196 PF00196 * GerE 3e-07 51.9 %
:HMM:PFM   8->117 PF00072 * Response_reg 1.6e-27 36.4 110/112  
:HMM:PFM   142->197 PF00196 * GerE 5.9e-21 50.0 56/58  
:HMM:PFM   86->161 PF04675 * DNA_ligase_A_N 0.00037 16.0 75/176  
:BLT:SWISS 3->200 FIXJ_BRAJA 2e-38 38.9 %
:PROS 8->19|PS00136|SUBTILASE_ASP
:PROS 158->185|PS00622|HTH_LUXR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58189.1 GT:GENE ABA58189.1 GT:PRODUCT two component transcriptional regulator, LuxR family GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1921034..1921651) GB:FROM 1921034 GB:TO 1921651 GB:DIRECTION - GB:PRODUCT two component transcriptional regulator, LuxR family GB:PROTEIN_ID ABA58189.1 GB:DB_XREF GI:76883508 InterPro:IPR000209 InterPro:IPR000792 InterPro:IPR001789 LENGTH 205 SQ:AASEQ MATREPMVFIVDDGVTVRNSLGPSLQSVGYRVKVCESAEAFLKVYEPNQPGCIILDVQMPESTGLDLQEYLVSEQIPIPVIFITGQADVPTVVRAVKQGAVDFLLKPFDFETLLRSIQEAIELDQIKRTERAQRDTIEKRLASLTPRERDVLDKVIEGKLNKVIAAELEVSIRTVEIHRARLMAKMKVRRPTELARLVLKLRRSS GT:EXON 1|1-205:0| BL:SWS:NREP 1 BL:SWS:REP 3->200|FIXJ_BRAJA|2e-38|38.9|198/205| PROS 8->19|PS00136|SUBTILASE_ASP|PDOC00125| PROS 158->185|PS00622|HTH_LUXR_1|PDOC00542| BL:PDB:NREP 1 BL:PDB:REP 5->200|1yioA|6e-43|41.8|196/198| RP:PDB:NREP 2 RP:PDB:REP 1->58|2dvyD|3e-06|8.6|58/214| RP:PDB:REP 29->190|3cwoX|4e-31|14.8|162/236| RP:PFM:NREP 2 RP:PFM:REP 8->118|PF00072|3e-12|37.8|111/111|Response_reg| RP:PFM:REP 143->196|PF00196|3e-07|51.9|54/57|GerE| HM:PFM:NREP 3 HM:PFM:REP 8->117|PF00072|1.6e-27|36.4|110/112|Response_reg| HM:PFM:REP 142->197|PF00196|5.9e-21|50.0|56/58|GerE| HM:PFM:REP 86->161|PF04675|0.00037|16.0|75/176|DNA_ligase_A_N| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 2->122|1a0oA|4e-19|27.3|121/128|c.23.1.1| RP:SCP:REP 138->202|1a04A1|8e-15|38.5|65/67|a.4.6.2| HM:SCP:REP 3->192|1s8nA_|5e-33|29.1|189/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 6156 OP:NHOMOORG 830 OP:PATTERN -------------------------------1-----------21--2-----------1-------- ATI2D2243343-254433-392249333333B6666DCB533A56323322122222--1572B78CCG42111222112-51244555C9-4-----317298L8G341--1------11111---42222-63BCCIF765M4N9CIFD77812223537AB68LKP934333334332237511232456888887A77B8A979CA885C8B97688873544444HO555555534555555444433---11-1---33--111--122---333221221122223332323212222211222331211122245D5894446455423134433416542-93862C97741331564342-1CAH87763333387QBD96AIGCGBAA8AAAA9A8C-DEFCGECI7BD-DHHAIEDIOFLIHD665B8888989DB8888888845534D4811111111111111111111111111--124985269557ICEJDD7CCCAFFMQDDDD7BCDHCBFG24BD8DF855B7DKC4688AHAE992222212346EFO8MdI9AUE3ELJJJ3QKVQOQWBHECIDLCDO1--11-1-11-1-12111112522366FA58B8B3976EEFFD6DEIKICGFEFCHG--29A76------9457985999B99AB89-99A89AB8989A999988998979657DACDCDDDDDCBDBDC988966794-978999888999--1644444222235K7D111312-2222-2235567657213A8GGHGJJPGCIGKK9HGG-----1---68CCHDDEEDFNGHI8BA7A76667344421836678991111111141--------------------------151-1-3---4Q2 --------------1-----------------------------------------------------------------------------------------------------------------------------------------------1--------------2--1-----1--3--7-31211---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 99.5 SQ:SECSTR ccEEEEEEEEEcccHHHHHHHHHHHHTcEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcccccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHTGGGEEEEEEEEEEETTTTEEEEEEHHHHHHHHHHHTccEEEEEETTTTTccccccHHHHHHHGGGcccHHHHHHHHHTcc# DISOP:02AL 1-3, 127-143, 204-205| PSIPRED ccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcc //