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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58208.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  104/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.124.1
:728 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   196->330,491->607 2oasA PDBj 6e-11 39.5 %
:RPS:PDB   187->282,435->610 3eh7A PDBj 5e-28 28.8 %
:RPS:SCOP  235->336,440->611 2g39A2  c.124.1.2 * 5e-37 26.5 %
:HMM:SCOP  234->634 2g39A2 c.124.1.2 * 8.4e-49 32.7 %
:RPS:PFM   204->280 PF04223 * CitF 8e-04 35.1 %
:HMM:PFM   249->308 PF00455 * DeoR 0.0003 28.8 59/157  
:BLT:SWISS 196->338,440->609 CAT2_CLOK5 1e-11 31.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58208.1 GT:GENE ABA58208.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1946618..1948804 GB:FROM 1946618 GB:TO 1948804 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58208.1 GB:DB_XREF GI:76883527 LENGTH 728 SQ:AASEQ MVRNSNRPTYYADVESCVENILSKVGKNIVLGIPIGLGKPNQLVNEFFRRATKDPTLRLKIFTALTLTKPQWKNGLERRLVEPLSARIFGNYPELDYISALERSQLPPNIEVAEFYFQPGQLLHNSHAQQNYVSSNYTHVVRDSLDSDMNVFAQLISSAKQWENKTYYSLSCNADLTPDLIPKMRGLEKSGKKIAILGQINPELPFMYGDAQVPSENFDAIVDHPQYAFKLFGPPNMAINPSDYMIGLHASALIKDGGTIQLGIGSLSDAVTYLIKMRHQYNAVYCALLSEANVLGKFEKMIHNVGGNEPFKEGLYATSEMFVDGFMQLYRSGILKRKVYPHETLQRLLNENKLSHQISPAALTRLIEEKIIHPQLSEKEVTLLQQWGIFKMELKYQNGFIYPPNEIPIPADLADSQSAEKIYRHCLEPHIKGGHLLHASFFLGPQRFYNFLRGLKKEEREQFCMKRVAYVNQLYGSEELKRLQRKDARFLNSALMVTLNGAIISDKLEDGRTVSGVGGQYNFVAMAHALVDARSIIMLRSVREKHGEIHSNIIWNYGHTTIPCHLRDMVVTEYGIANLRGKNDREIIIALLNITDSRFQDFLLREAQKAGKISKNYQIPDDFKDNYPARLKKHLRPYKDQGYLPEFPFGTEFTPEEIALTKAFEAIQTMIAKKRFPIPNKHQLRAILSAPEIATPYLQRLQLDKPTTMKDKLMQKLVLYGLSQTGAM GT:EXON 1|1-728:0| BL:SWS:NREP 1 BL:SWS:REP 196->338,440->609|CAT2_CLOK5|1e-11|31.4|263/429| SEG 645->657|pefpfgteftpee| BL:PDB:NREP 1 BL:PDB:REP 196->330,491->607|2oasA|6e-11|39.5|235/420| RP:PDB:NREP 1 RP:PDB:REP 187->282,435->610|3eh7A|5e-28|28.8|251/389| RP:PFM:NREP 1 RP:PFM:REP 204->280|PF04223|8e-04|35.1|77/463|CitF| HM:PFM:NREP 1 HM:PFM:REP 249->308|PF00455|0.0003|28.8|59/157|DeoR| GO:PFM:NREP 4 GO:PFM GO:0005737|"GO:cytoplasm"|PF04223|IPR006472| GO:PFM GO:0006084|"GO:acetyl-CoA metabolic process"|PF04223|IPR006472| GO:PFM GO:0008814|"GO:citrate CoA-transferase activity"|PF04223|IPR006472| GO:PFM GO:0009346|"GO:citrate lyase complex"|PF04223|IPR006472| RP:SCP:NREP 1 RP:SCP:REP 235->336,440->611|2g39A2|5e-37|26.5|225/274|c.124.1.2| HM:SCP:REP 234->634|2g39A2|8.4e-49|32.7|257/0|c.124.1.2|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 121 OP:NHOMOORG 107 OP:PATTERN ------------------------------------------------2------------------- --------------1------1---1------1--------------------------------------------------------------------------------------------11111111111--------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------1-------1-1-111------------1-11---4--------11------------------111---------------------------1-1--------------1--------------------------1--------------------------------------------------------------------------1------1----1-----------------1--231------------21----1-1111--4-------------------------------13-121--11--1111111111-111----1----------------------------------------------------------------------------------------------------------11-----------------------------1111111111111-111-------------1----------111111111-------1-----11------------------------------------------1------ -----------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 455 STR:RPRED 62.5 SQ:SECSTR #######################################################################################################################################################################cTTcccTTHHHHHHHHHTTHHHccEEEEEEEcccGTTcccEEccEEEGGGccEEEEcccccccccccccHHHHHHHHHHHHHHGHTccTTcEEEccccHHHHHHHHTTTTccccEEETcTTcEEccccccccccccEEccHHHHHHHHTTcccEEEEEccEEETTcccTTHHHHHHHEHHTTTcEEEEEEcEEEcTTcccTTTEEEcGGGccEEEEcTTccccTTcccccHHHHTccccccccHHHHHHHHHHTTccTTcEEEcccccTTcEEcEEccHHHHHHHTEEcTTTcTTEEEccHHHHTcHHHHHHHHHHTTcccEEEEcccEEETTccEEcccTTTccccccccTHHHHHHHHHHcTTcEEEEcccEETTTTEEcEEccccTTccEEEcTTTccEEEETTEEEEcTTccHHHHHHHHHTTccHHHHHHHHHHHHHHcEEEEEEEEccc########################################################################################################## DISOP:02AL 1-9, 726-728| PSIPRED cccccccccEEEcHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHccccEEHEEEEcccccccccccEEEEEEcHHHHHHHHHHcccccEEEEEEEEccccccccEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccEEEHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccEEccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHcccccccccEEEHHHHHHHHHHHHHHccccccccccEEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEEEEEEccHHHccHHHHHccccEEEEccEEEEEEEEEEEEEEcccEEEEEEcHHHHHHHHHHHcccccEEEEEEEEcccccEEEEEEccccccccccccccEEEEEEEEEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHcccHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccHHHHHHHHHccccHHHHHHccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHccc //