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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58217.1
DDBJ      :             Radical SAM domain Fe-S oxidoreductases
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  152/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->193 1tv7B PDBj 4e-04 23.8 %
:RPS:PDB   24->289 3ciwA PDBj 1e-18 11.1 %
:RPS:SCOP  37->193 1tv7A  c.1.28.3 * 3e-24 22.3 %
:HMM:SCOP  24->308 1tv8A_ c.1.28.3 * 5.5e-50 25.0 %
:RPS:PFM   38->168 PF04055 * Radical_SAM 7e-06 26.7 %
:RPS:PFM   195->329 PF11946 * DUF3463 3e-61 71.6 %
:HMM:PFM   195->334 PF11946 * DUF3463 4.3e-72 67.6 139/141  
:HMM:PFM   34->186 PF04055 * Radical_SAM 5.4e-16 24.0 150/166  
:BLT:SWISS 37->191 MOAA_ARCB4 1e-11 27.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58217.1 GT:GENE ABA58217.1 GT:PRODUCT Radical SAM domain Fe-S oxidoreductases GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1961598..1962716 GB:FROM 1961598 GB:TO 1962716 GB:DIRECTION + GB:PRODUCT Radical SAM domain Fe-S oxidoreductases GB:PROTEIN_ID ABA58217.1 GB:DB_XREF GI:76883536 InterPro:IPR007197 LENGTH 372 SQ:AASEQ MGIPLIQQYRVGRYILSKKIRGEKRYPLVLMLEPLFRCNLACAGCGKIDYSEEILDRRLSPQECFDAVDECGAPIVSIPGGEPLIHKEMPQIVAGIVKRKKFVYLCTNALLLSKRLKDYTPSPYLTFSVHLDGNREHHDASVCQEGVFDRAVAAIKLCRERGFRVTVNCTLFHGAKPKEVAEFFDYCMNLGIEGVTLSPGYSYERAPRQDIFLQRAASKRLFRDIFRLDKERKWHFNQSSLFLDFLAGNQTYQCTPWGNPTRNIFGWQRPCYLFSEDGYAPTFKALMEETDWSKYGTGNHPKCANCMAHCGYEPTAVNDTFAHPLKAFKVFLRGPRLEGPLAPELPINYSEKPDDTASIPVDSLRHKSREAS GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 37->191|MOAA_ARCB4|1e-11|27.9|154/323| BL:PDB:NREP 1 BL:PDB:REP 30->193|1tv7B|4e-04|23.8|164/326| RP:PDB:NREP 1 RP:PDB:REP 24->289|3ciwA|1e-18|11.1|262/344| RP:PFM:NREP 2 RP:PFM:REP 38->168|PF04055|7e-06|26.7|131/164|Radical_SAM| RP:PFM:REP 195->329|PF11946|3e-61|71.6|134/139|DUF3463| HM:PFM:NREP 2 HM:PFM:REP 195->334|PF11946|4.3e-72|67.6|139/141|DUF3463| HM:PFM:REP 34->186|PF04055|5.4e-16|24.0|150/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 37->193|1tv7A|3e-24|22.3|157/327|c.1.28.3| HM:SCP:REP 24->308|1tv8A_|5.5e-50|25.0|284/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 186 OP:NHOMOORG 173 OP:PATTERN ------1-111111-2----1--11--1--1------------------3211--------112---- 211-1-----------------------------------1222---------------------11111-------------1-1------------------------------------------------------------1111111-----------1111111--------------------1----------------------------------------------------------------------------------------------------------------------------111----1-------------------111--------------1---1-1111----1----------1111111111111------------11111111-------------------------------11111111111112-1----------------------------------1----11111111111111111111-11111111-----1-------------1------------1111-1-2-1-1--112111-111111111--1---121------------------------11----1-1--------------------------1---------------------------------------------------------------------------------------------------------1-----------------------------1-1111---------1-----------------------------------------------------------------------------------------1-------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 71.5 SQ:SECSTR #######################cEEEEEEEEEEEcccccccTTcTTcTTccccccccccHHHHHHHHHHTTccEEEEEEcccGGTTHHHHHHHHHHHTTTcEEEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEccEEccTTccHHHHHHHHHHHHHHTccEEccEEcccccccTTcTTTTcccccHHHHHHHHHHHHHHHHcTTHHHHHHTTTccEEccccccTTTGGGccccTTcTTTTTccTTcHHHHHHHHHH################################################################################### DISOP:02AL 367-372| PSIPRED ccccHHHHHHHHHHHHHccccccccccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHccccEEEEEEccccHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEccccccHHccccHHHHHHHHHHHHHHHHccccccEEcccEEEEEccccccccccccccEEcccccEEccEEEccccccccHHHHHccHHHHHcccccccHHHHHcccccccHHHHHHHHHccHHHHHHHHcccccccccccccccccccccccEEHHHHHHHHHHHcccc //