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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58221.1
DDBJ      :             4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  736/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   8->327 3e59B PDBj 7e-21 12.0 %
:RPS:SCOP  11->111 1rzmA  c.1.10.4 * 1e-07 17.3 %
:RPS:PFM   8->354 PF04551 * GcpE 6e-53 43.6 %
:HMM:PFM   8->371 PF04551 * GcpE 1e-111 41.8 347/359  
:BLT:SWISS 1->377 ISPG_RHOBA e-155 69.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58221.1 GT:GENE ABA58221.1 GT:PRODUCT 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1967736..1968881 GB:FROM 1967736 GB:TO 1968881 GB:DIRECTION + GB:PRODUCT 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase GB:PROTEIN_ID ABA58221.1 GB:DB_XREF GI:76883540 InterPro:IPR004588 LENGTH 381 SQ:AASEQ MELPRNPTRPVRIGTITIGDNNPVAVQSMCATHTRDVGATVKQINDLIKAGADVVRIAVDTKRDVEALIEIRQQTQANLSVDLQENYRLAKTVAPHVDKIRYNPGHLYHHERQKPWQDKVKFLLEVAGENDCAVRIGVNGGSVDPAKASQFSEGDSISPMLASALEHCELLDTLGFIRYCVSLKDSDPTKVIELNQRFAAERPDIPLHLGVTEAGMPPEGVIKTRIAFEQLISRGIGDTIRVSLTLPFDRKGDEIEAGRQILADIAAGRVRSVVDYGLKSLNIISCPSCSRVENEAFIDLAQEVKAMTEYAADYAVTIAVMGCRVNGPGETDDADLGLWCGPKAVNLKRGSKTLGSYSYHDILPRLKEELDIIISERTETA GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 1->377|ISPG_RHOBA|e-155|69.2|377/382| RP:PDB:NREP 1 RP:PDB:REP 8->327|3e59B|7e-21|12.0|283/305| RP:PFM:NREP 1 RP:PFM:REP 8->354|PF04551|6e-53|43.6|326/353|GcpE| HM:PFM:NREP 1 HM:PFM:REP 8->371|PF04551|1e-111|41.8|347/359|GcpE| GO:PFM:NREP 3 GO:PFM GO:0016114|"GO:terpenoid biosynthetic process"|PF04551|IPR004588| GO:PFM GO:0046429|"GO:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"|PF04551|IPR004588| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04551|IPR004588| RP:SCP:NREP 1 RP:SCP:REP 11->111|1rzmA|1e-07|17.3|98/338|c.1.10.4| OP:NHOMO 787 OP:NHOMOORG 760 OP:PATTERN -------------------------------------------------------------------- 111121111111-111111-1111211111111111111111111111111111111111111111122111111111111111111111111111---------1111111111111111111111111111111-----111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11-111--111-----------------------------------------------------------------------------------------1111111111111111111111111111111111111111111111111-111111111111111111111111111111111111-11111111111-11111111111111111111111111111111111111111111111111111---------------111111111111111111111111111111111111111111111111111111111111111111111111111211111-111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111--11111--11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111---------1111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111--------11------------1------1------1111111111111 11------1---------------------------------------------------------------------------------------------------3-------------------------------------------------1----------------1111F111113122-2111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 316 STR:RPRED 82.9 SQ:SECSTR ###cHHHcHHHHHTTHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccTTTcccccccHHHHHHHHHHHHHHHHHTTcTTcEEEEEEccHHHHGcEEEETTTGGGTccHHHHHHHHHHHHHHHHHTTcTTEEEEGGGcGGGGGGTTcHHHHHHHHHHHHcccHHHHHHHHTTcHHHHHHHHHHHHHHHHHHccTTccccHHHHHHHHHHHHHHHHHHHHHcTTcEEEEccHHHcccTTccEEEccccTTcHHHcccccGGGcccGGGcEEEEETTEEEEEcHHEEEEcHHH########HHTTTcEEEEETT###################################################### DISOP:02AL 1-4, 378-381| PSIPRED cccccccccEEEEccEEEcccccEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEccccccccccccHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEccccccccEEEcHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccccccccEEEEEccccEEEEEccEEEEcccHHHHHHHHHHHHHHHHHHHHccc //