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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58230.1
DDBJ      :             response regulator receiver modulated diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  665/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.1.33c.23.1d.110.3d.58.29f.55.1
:700 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->136 3cfyA PDBj 2e-08 29.4 %
:BLT:PDB   277->437 3iclA PDBj 6e-27 39.6 %
:BLT:PDB   445->678 3ii8B PDBj 3e-53 49.1 %
:RPS:PDB   1->117 3b8mC PDBj 5e-09 9.6 %
:RPS:PDB   94->685 2btvA PDBj 3e-75 9.3 %
:RPS:SCOP  13->132 1a0oA  c.23.1.1 * 7e-17 19.3 %
:RPS:SCOP  137->262 2axtC1  f.55.1.1 * 8e-11 8.1 %
:RPS:SCOP  279->437 1w25A3  d.58.29.2 * 6e-37 33.3 %
:RPS:SCOP  453->697 2basA1  c.1.33.1 * 3e-64 18.5 %
:HMM:SCOP  9->144 1k66A_ c.23.1.1 * 2e-24 30.1 %
:HMM:SCOP  159->271 1dp6A_ d.110.3.2 * 6.7e-16 28.2 %
:HMM:SCOP  279->438 1w25A3 d.58.29.2 * 2.4e-56 42.1 %
:HMM:SCOP  450->697 2basA1 c.1.33.1 * 2.4e-86 50.2 %
:RPS:PFM   17->117 PF00072 * Response_reg 6e-09 32.3 %
:RPS:PFM   154->264 PF08448 * PAS_4 2e-06 34.3 %
:RPS:PFM   276->425 PF00990 * GGDEF 2e-34 46.7 %
:RPS:PFM   452->684 PF00563 * EAL 1e-66 50.2 %
:HMM:PFM   452->684 PF00563 * EAL 2.3e-68 37.7 228/236  
:HMM:PFM   275->427 PF00990 * GGDEF 1.7e-50 42.5 153/161  
:HMM:PFM   17->127 PF00072 * Response_reg 3.9e-18 32.7 110/112  
:HMM:PFM   154->264 PF08448 * PAS_4 5.2e-11 24.8 109/110  
:BLT:SWISS 16->170 PILR_PSEAE 7e-09 31.7 %
:BLT:SWISS 268->690 Y1727_PSEAE e-104 46.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58230.1 GT:GENE ABA58230.1 GT:PRODUCT response regulator receiver modulated diguanylate cyclase/phosphodiesterase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1977912..1980014 GB:FROM 1977912 GB:TO 1980014 GB:DIRECTION + GB:PRODUCT response regulator receiver modulated diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ABA58230.1 GB:DB_XREF GI:76883549 InterPro:IPR000014 InterPro:IPR000160 InterPro:IPR000700 InterPro:IPR001633 InterPro:IPR001789 LENGTH 700 SQ:AASEQ MKRHQHRGINKMRGLRVLIVEDSEDDALLLERHLRRGDYQPFVKRVETRETMLAALQTQPWDIILSDHSLPHFGSMDALTLLQKESIDIPFIMVSGTVGEDRAVEIMKAGAHDYIMKDNLRRLVPAVERELREANIRRQRQAVENERARLSSILEATPDLVAIMDLEGRIHYMNQAGRQWLGFIKKNHYAGASLLAHYPLWTASLIRDTAIPAALREGVWEGEAVILNPSGGEIPVSQVILSHRNALNQVEFLSTIARDISERKHYEQELQYRVTHDTLTHLPNRILLRDRLIQVLAHAKRNQRLTAVLFLDVDNFKQINDGLGHLTGDKCLRTLAHHLAGCIRESDTLGRYGGDEFLIILSDLRSYSDVETLIKKIRATVSQPLKLNNNDVFITLSIGVSLYPQDGDDEEALLKTADAAMHTAKHSSPGQCRYYRPEMNVRGSELLALETDLHRALEREEFVLYYQPQLDVTTGQITAVEALIRWQHPNRGLVSPRDFIPLLEQTGLIEEVGKWGLNTACRQAKAWHSQGYPIRMAVNCSARQFQQHFLDIVHQILQKQSLDPAYLELEVTESVVMQDTQSATYILQRLKEMGVTLAIDDFGTGYSSLAYLKRFPIHSLKIDCSFVRDVTKNEEDAAIAETILLLGNSLGLEVVAEGVETEAQMRFFQDRHCHRIQGYWIGRPMPAKDLFPLITGRNNP GT:EXON 1|1-700:0| BL:SWS:NREP 2 BL:SWS:REP 16->170|PILR_PSEAE|7e-09|31.7|145/445| BL:SWS:REP 268->690|Y1727_PSEAE|e-104|46.0|422/685| BL:PDB:NREP 3 BL:PDB:REP 16->136|3cfyA|2e-08|29.4|119/130| BL:PDB:REP 277->437|3iclA|6e-27|39.6|159/159| BL:PDB:REP 445->678|3ii8B|3e-53|49.1|230/256| RP:PDB:NREP 2 RP:PDB:REP 1->117|3b8mC|5e-09|9.6|115/255| RP:PDB:REP 94->685|2btvA|3e-75|9.3|528/845| RP:PFM:NREP 4 RP:PFM:REP 17->117|PF00072|6e-09|32.3|99/111|Response_reg| RP:PFM:REP 154->264|PF08448|2e-06|34.3|105/111|PAS_4| RP:PFM:REP 276->425|PF00990|2e-34|46.7|150/160|GGDEF| RP:PFM:REP 452->684|PF00563|1e-66|50.2|233/236|EAL| HM:PFM:NREP 4 HM:PFM:REP 452->684|PF00563|2.3e-68|37.7|228/236|EAL| HM:PFM:REP 275->427|PF00990|1.7e-50|42.5|153/161|GGDEF| HM:PFM:REP 17->127|PF00072|3.9e-18|32.7|110/112|Response_reg| HM:PFM:REP 154->264|PF08448|5.2e-11|24.8|109/110|PAS_4| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 4 RP:SCP:REP 13->132|1a0oA|7e-17|19.3|119/128|c.23.1.1| RP:SCP:REP 137->262|2axtC1|8e-11|8.1|123/447|f.55.1.1| RP:SCP:REP 279->437|1w25A3|6e-37|33.3|159/162|d.58.29.2| RP:SCP:REP 453->697|2basA1|3e-64|18.5|238/257|c.1.33.1| HM:SCP:REP 9->144|1k66A_|2e-24|30.1|136/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 159->271|1dp6A_|6.7e-16|28.2|110/0|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 279->438|1w25A3|2.4e-56|42.1|159/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 450->697|2basA1|2.4e-86|50.2|245/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 10913 OP:NHOMOORG 690 OP:PATTERN -----------------------183221213--2--------14--71-11---------------- MD67B---111---15422-2F44-122222-A4447E65EJEbv-------647-----CA3-G4K5553----1----H28CGO8B---------------111212----------------11122111162CCCCA111C5tYZPPP333HH---3--FR92JHS4------------P4B538818C2888885682878778-23333887586H2PN454555BF-1111111111111111111--1---3----22------11-------------------------------------------------6DA9O8888888A7C4YCB6798C58--7EE8AMKIE675AA633463--C489CC81111139bVVC9IZVMWY5688588687H-ZURSSASUCT71LTTSYaRacdJIXGBGD4C4CGAB9B6--------HGG5-rFX11111111222222222222222121111-9AJA5HFD52MIIIJLG8887IIYgBBBB59NXYHSKc-3VUOeIdNPc13rA7WXZWNchhR-------AAJRpt6LTKMLPUDoVMLO1QMSdNTMaT6557E766M997-11111----------ZMUYI43jeIknftVtbtzxwxwkuhvspiomidh*x---FfJi------MQNE4VDOOOMOMOOOL-LOMQOIHNNNMMMLNNMNQRUNKN--1GAEHHHGGGGHIHHHHGDEBB9GG1-H56667745666---Y-1-1-KNLMGB*Kv---------------BABBB4913-KeabdYcmggkeccdYXbf-----2---dSZZUijiihjkf**TRUVVVSNOS5444--e2EECAMN1222222271B-------------------------A85A77A767-5- ----1------------------------------------------------------------------------------------------1--------------------------------------------------------------2----6---------E3----------2--D-----A---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 700 STR:RPRED 100.0 SQ:SECSTR HTTcccccccccTcEEEEEEcccTTHHHHHHTTcccTTEEcEEEEEccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHTTcTTTTTccEcccccccccHHHHHHHHTTccEEEHHHHGGGGccccEEEcccccccEEEcccccccEEEEccHTTEEHHHHHcccccccTTcHHHHHHHccccTTHHHHHHHHHHHHcEcccEEEEEcccccEEEcccEEEETTEEEEcGGGcccccTTcTTTccHHHHHHHHHHHTTccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTEEEccGGGcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHHHHHccEEEEEcccHHHHccHcTTGGGcHHHTccccccccGGGGGGccccHHHHHHHHHHHHHHHHTccccEEcccccccGGGccHHHHHHHHHHHHHHHHHHccccccccTTTccEEEEEEcccHHHHHHHHHHHHHHHTTcccccccEEccccccTTcGGGGcccTTTccccccccccccEEcccccccccccEEcGGGcccccccccTTTcccccccHHHHHHHHHHHHHccHHHHHHHHTTHHHHHHHHHHHHHHHHTTcccTTTcccHHHHHHHHHHHHHccccccccEEccccTTHHHHHHTcEEEEEEccTTTTTHHHcccccTcEEEETccc DISOP:02AL 1-11, 697-700| PSIPRED cccccccccccccccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEcHHHHHHHcccHHHHHccccHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHccEEEccEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEEEEEccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHcHHHHHHHHHHHHHccccHHHEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEHHHccccccHHHHHHHHHHcccc //