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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58242.1
DDBJ      :             Sodium/dicarboxylate symporter
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  642/915 : Eukaryota  104/199 : Viruses  0/175   --->[See Alignment]
f.49.1
:405 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->398 2nwxB PDBj 2e-52 39.2 %
:RPS:SCOP  26->398 1xfhA  f.49.1.1 * 2e-76 36.7 %
:HMM:SCOP  9->399 2nwwA1 f.49.1.1 * 2.3e-107 46.0 %
:RPS:PFM   32->398 PF00375 * SDF 7e-68 47.8 %
:HMM:PFM   9->398 PF00375 * SDF 2.9e-134 49.0 384/390  
:BLT:SWISS 34->399 EAA1_CAEEL 2e-61 40.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58242.1 GT:GENE ABA58242.1 GT:PRODUCT Sodium/dicarboxylate symporter GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1993890..1995107 GB:FROM 1993890 GB:TO 1995107 GB:DIRECTION + GB:PRODUCT Sodium/dicarboxylate symporter GB:PROTEIN_ID ABA58242.1 GB:DB_XREF GI:76883561 InterPro:IPR001991 LENGTH 405 SQ:AASEQ MPHRTALILLGLIIVGVIAGVLAGWYAGPRMEAVAWLGALFLNALKMTIIPLILSAVITGVASLGDVRKLGRVGTITIGYYACTTAIAVAIGLLMVNLIQPGSGISLGEGPIPEGVAAKGEMGIDDILLSLVSPNLVNAAAEGQLLPLIVFAILFSATLTTLGDKGQPVLAFFEGVNEAMMKLVVWIMYLAPVGIFALIAARLGQTGGGEAFLGEVSAVGWHVVTVLSGLALHFGVLLLILFFITGRGWDYLFTMLRALLTAFGTASSSATLPLTMECVRENGIDPRAVRFVLPLGSTINMDGTALYESAAAMFIAQAYGISLGLEQQALIFVTATLAAIGAAGIPEAGLVTLVIVLNAVGLPLEGVGLLLAVDWFLDRFRTSINVWGDSVGAAVLARFLPNNPS GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 34->399|EAA1_CAEEL|2e-61|40.9|362/503| TM:NTM 10 TM:REGION 4->26| TM:REGION 38->60| TM:REGION 75->97| TM:REGION 142->164| TM:REGION 175->197| TM:REGION 228->250| TM:REGION 256->278| TM:REGION 306->326| TM:REGION 328->350| TM:REGION 355->377| SEG 6->24|alillgliivgviagvlag| SEG 334->345|tatlaaigaagi| SEG 360->373|vglplegvglllav| BL:PDB:NREP 1 BL:PDB:REP 38->398|2nwxB|2e-52|39.2|344/396| RP:PFM:NREP 1 RP:PFM:REP 32->398|PF00375|7e-68|47.8|362/392|SDF| HM:PFM:NREP 1 HM:PFM:REP 9->398|PF00375|2.9e-134|49.0|384/390|SDF| GO:PFM:NREP 3 GO:PFM GO:0006835|"GO:dicarboxylic acid transport"|PF00375|IPR001991| GO:PFM GO:0016020|"GO:membrane"|PF00375|IPR001991| GO:PFM GO:0017153|"GO:sodium:dicarboxylate symporter activity"|PF00375|IPR001991| RP:SCP:NREP 1 RP:SCP:REP 26->398|1xfhA|2e-76|36.7|365/405|f.49.1.1| HM:SCP:REP 9->399|2nwwA1|2.3e-107|46.0|383/0|f.49.1.1|1/1|Proton glutamate symport protein| OP:NHOMO 2303 OP:NHOMOORG 765 OP:PATTERN 112-1-------------------111---2------------------11-1-1111112------1 -12-112-2222312--11-11--1211111-12221364-1-11-21-111345221--11--216122-1-------212-1-1--11------1--113112412121111111111111121----1---11-------------2----------------1111-------------122------134464544545555552133535543254221------21211121111111111211132-1-11-11-11111--211------11111112---1111-11---1111111111111-11111111--23123333323435-311333311-54-1---2112---1--111--323-132241111131853---2111-----------1-3364373512-232211132111142111--2-------21222222---112-1--1--111--1111111111111111111-224312----B7778A444432257544434533334512334113114212421111111251111111111--3--2-2---123---1111---1-12212311-12331322331---------12-1---542322221225777755877766696686---1---------74444533443333333-4323433343434333334444552224444444454244443433232331-44444444444411-1-----232211-22222-211222211118888838223323353367615477233222222222214558454437565433333333333333---2111111--------1-1------1-----------------------------1- -------------1111111-------111111-----------------11111211----------------------------------1----------2-1--417EMFGE977557A6FH3C7Ju7-B8H4757A677847747753G6A87958C2B812434C77A3-1117----22--11-22-8597- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 353 STR:RPRED 87.2 SQ:SECSTR #####################################HHHHHHHHHHHHHHHHHHHHHHTTcccTTTT#HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc##cccccccccccHHHHGGGccccHHHHHHcccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG##GGccTHHHHH###HHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHTHHHHHHHHHHccHHHHHHHHHHHHHTTTccTTTHHHHHHHHHHHccHHHHHHHHHHHHHHHHHTTccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcTTHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHH####### DISOP:02AL 1-2, 65-71, 105-122, 403-405| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHcccHHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //