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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58243.1
DDBJ      :             PpiC-type peptidyl-prolyl cis-trans isomerase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  610/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
a.223.1d.26.1
:640 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->369 1m5yB PDBj 2e-19 32.2 %
:RPS:PDB   205->404 2bjrB PDBj 9e-27 14.1 %
:RPS:SCOP  42->219 1m5yA1  a.223.1.2 * 1e-15 16.9 %
:RPS:SCOP  269->373 1m5yA2  d.26.1.1 * 1e-30 28.2 %
:HMM:SCOP  38->244 1m5yA1 a.223.1.2 * 2.6e-25 27.5 %
:HMM:SCOP  263->373 1m5yA3 d.26.1.1 * 8.1e-37 53.3 %
:RPS:PFM   40->164 PF09312 * SurA_N 1e-08 32.8 %
:RPS:PFM   290->369 PF00639 * Rotamase 4e-20 54.4 %
:RPS:PFM   504->589 PF05203 * Hom_end_hint 7e-04 32.1 %
:HMM:PFM   273->369 PF00639 * Rotamase 6.4e-34 58.5 94/95  
:HMM:PFM   43->156 PF09312 * SurA_N 0.00033 23.8 105/118  
:BLT:SWISS 1->635 PPID_ECOLI 4e-61 26.4 %
:PROS 307->328|PS01096|PPIC_PPIASE_1
:TM
:REPEAT 2|283->405|503->619

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58243.1 GT:GENE ABA58243.1 GT:PRODUCT PpiC-type peptidyl-prolyl cis-trans isomerase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1995112..1997034) GB:FROM 1995112 GB:TO 1997034 GB:DIRECTION - GB:PRODUCT PpiC-type peptidyl-prolyl cis-trans isomerase GB:PROTEIN_ID ABA58243.1 GB:DB_XREF GI:76883562 InterPro:IPR000297 LENGTH 640 SQ:AASEQ MLEAIRNRAQGIFAWVIVGLIAIPFTLWGINNYMLDGGEALAASVNGEEISTREFRSAFLSYTQQLRFLMGASFPEEMLDDPATKQNVIEGLVEQRLVLDTAAKLGLGMSDSSLSQVIRSNKAFQGESGQFDSQRYEAVLGSQGLTPVAYEARLRSALLSEQLVSTLRLSAFTTQQEVEAIARLQQQKREIGYSIVPSATFRDVIEVSADKVRQYYDDHPEEFRIPEQVKVHYLRLTADSLATDIPLDEQTLRDFYEESEDQYRVPERRRASHILITVPPQGDEATRQQAQEKAEAVFERLQQGEDFEEVAKEVSDDPGSAQKGGDLGFFGRGVMDPAFEEAVFSLEETGALSEPVLSKFGYHIIKLTDIEAGEVKPFEAVSEELAQRYRRQIAEEQFYEQAEILDNLTYENPFTLEVAAETLGLSIETSEPFSQNGGSGIAANPKVVAAAFSEEVLREEMNSQTIELAPNDVVVVRLDKHLLADTKPFEEVREEIEEKLTLDQAMAQAQERGETLVAHLQQGESPETVFKEGGEAVWNEKKLYARDDQEIPSEVLKMAYELPHPESPENPVFAGQPLGSGDYAVVGLYRVENGNPGKLDEKARRSLAQEMEKAHGEMVYRDFIQELKSKADIKIYTENL GT:EXON 1|1-640:0| BL:SWS:NREP 1 BL:SWS:REP 1->635|PPID_ECOLI|4e-61|26.4|609/623| PROS 307->328|PS01096|PPIC_PPIASE_1|PDOC00840| TM:NTM 1 TM:REGION 9->31| NREPEAT 1 REPEAT 2|283->405|503->619| BL:PDB:NREP 1 BL:PDB:REP 69->369|1m5yB|2e-19|32.2|289/377| RP:PDB:NREP 1 RP:PDB:REP 205->404|2bjrB|9e-27|14.1|163/350| RP:PFM:NREP 3 RP:PFM:REP 40->164|PF09312|1e-08|32.8|116/117|SurA_N| RP:PFM:REP 290->369|PF00639|4e-20|54.4|79/91|Rotamase| RP:PFM:REP 504->589|PF05203|7e-04|32.1|84/360|Hom_end_hint| HM:PFM:NREP 2 HM:PFM:REP 273->369|PF00639|6.4e-34|58.5|94/95|Rotamase| HM:PFM:REP 43->156|PF09312|0.00033|23.8|105/118|SurA_N| GO:PFM:NREP 4 GO:PFM GO:0016853|"GO:isomerase activity"|PF00639|IPR000297| GO:PFM GO:0003677|"GO:DNA binding"|PF05203|IPR007868| GO:PFM GO:0004519|"GO:endonuclease activity"|PF05203|IPR007868| GO:PFM GO:0030908|"GO:protein splicing"|PF05203|IPR007868| RP:SCP:NREP 2 RP:SCP:REP 42->219|1m5yA1|1e-15|16.9|166/173|a.223.1.2| RP:SCP:REP 269->373|1m5yA2|1e-30|28.2|103/107|d.26.1.1| HM:SCP:REP 38->244|1m5yA1|2.6e-25|27.5|160/0|a.223.1.2|1/2|Triger factor/SurA peptide-binding domain-like| HM:SCP:REP 263->373|1m5yA3|8.1e-37|53.3|107/0|d.26.1.1|1/1|FKBP-like| OP:NHOMO 1403 OP:NHOMOORG 665 OP:PATTERN -------------------------------------------111--------------------11 223-----------------------------------------------------------------------------1-1112111111-2--1--1-221--4312---------------2222222223213311---11-------------------------------------111-111-112333334332333453111122433111211122222211-11111111111111---------------------------------------------------------------------------222122222222222-3222111-2122---1111111-1-1-1112---31-211122222232322222522322122221213-222233233221222122222222321122222222322222222221222232211111---------11---------1111-11--132224433334333334424444433433444322233434445343244443333552222222333543351212211112221557556534224233332121322222111121111121-23-1213343332323222222443423323223--233341--11133332333333332333-3332233323333333333333332223333333333333333233322232-333333333333--13111112222323332221111111111112222222323334444224322322232211111111131112111111111133222222221212112-------11111111-----------------------------1----1-1-211 ----------1-111---------------------------------------------------111-1-1---11111--------------------------26-1-11--------1--2---121-111-1-111111-----1---1--12----311-------2---------1---14-11--1--21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 52.0 SQ:SECSTR ####################################################################HHHHTTTcccccHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHH#HHHHHHTTc#cHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHTTccccTTHHHHHHH#HcccEEEEEEEEEcccHHHHccccccEEEEEETTccccTTcccccGGGcccGGHTTTTTcEEEEEEEccccTTcccccEEEEEEETTEEEEEcccTTcccccHHHHHHHHEEEEETTEEEEEEEETTEEEcccccTTTccEEEEEEEHHHHTcccEEcccccTTccccEEEEEEETTEEEEEEEETTTTEEEEEETTEEEEEEGGGGcEEEEEEcTTccc############################################################################################################################################################################################################################################ DISOP:02AL 64-78, 539-550| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccEEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHccccccccccccccHHHHHHHHHccccccccccEEccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEcccccccccccccccHHHHHHHHHHHHcccccccccEEEcccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHccccEEEcccccccHHHHHHHHcccccccccccEEEEEEEccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEHHcc //