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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58279.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  545/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.52.1c.66.1
:849 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   43->101 3gwjA PDBj 6e-04 44.1 %
:BLT:PDB   160->435 2okcB PDBj 4e-18 27.5 %
:BLT:PDB   571->662 3hrlA PDBj 2e-10 46.9 %
:RPS:PDB   11->96 2ar0A PDBj 8e-06 20.7 %
:RPS:PDB   146->443 3clbC PDBj 1e-26 10.0 %
:RPS:PDB   555->662 1cw0A PDBj 9e-08 24.8 %
:RPS:PDB   777->848 2dulA PDBj 1e-05 11.8 %
:RPS:SCOP  186->438,773->849 2ar0A1  c.66.1.45 * 8e-23 21.2 %
:RPS:SCOP  555->664 1cw0A  c.52.1.15 * 5e-15 24.3 %
:HMM:SCOP  10->848 2ar0A1 c.66.1.45 * 6.3e-128 37.8 %
:RPS:PFM   12->161 PF12161 * HsdM_N 3e-15 47.1 %
:RPS:PFM   200->437 PF02384 * N6_Mtase 7e-53 46.7 %
:RPS:PFM   580->662 PF04480 * DUF559 1e-21 53.0 %
:HMM:PFM   199->438 PF02384 * N6_Mtase 4.5e-102 48.1 231/311  
:HMM:PFM   496->541 PF02384 * N6_Mtase 8.9e-08 37.0 46/311  
:HMM:PFM   772->809 PF02384 * N6_Mtase 2e-08 39.5 38/311  
:HMM:PFM   559->666 PF04480 * DUF559 5.5e-40 51.9 106/109  
:HMM:PFM   12->180 PF12161 * HsdM_N 7.2e-30 42.5 120/132  
:BLT:SWISS 103->437,505->539,773->848 T1MH_HAEIN e-126 67.0 %
:BLT:SWISS 563->663 Y925_HAEIN 2e-23 44.6 %
:PROS 717->730|PS00300|SRP54
:PROS 741->754|PS00300|SRP54
:REPEAT 2|710->733|734->756
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58279.1 GT:GENE ABA58279.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2046956..2049505) GB:FROM 2046956 GB:TO 2049505 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58279.1 GB:DB_XREF GI:76883598 InterPro:IPR000897 InterPro:IPR002296 InterPro:IPR003356 InterPro:IPR007569 LENGTH 849 SQ:AASEQ MNDTEQQFLKSLDNKLWKAADKLRANLDAANYKHVVLGLIFLKYVSDAFEERQEQLLALFKDESNDIYYLSPEDYDGDADYQQALRDELEILDYYREANVFWVPKAARWNTVKEKAVLPVGTVLWQDDAGNDVKLRSVSWLMDNALEAIEKSNAKLRGILNRISQYQLENEKLLGLINTFSDTSFTKPVYGGEKLHLHSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYSGRVYDPAMGSGGFFVSSDKFIEEHAKEQHYDPAEQKKHISVYGQESNPTTWKLAAMNMAIRGIDFNFGKKNADTFLDDQHPDLRADFVMANPPFNMKDWWSESLADDARWQYGTPPKGNANFAWMQHMIHHLAPTGSMALLLANGSMSAHTNNEGKIRQRLIEEDLVECMVALPGQLFTNTQIPACIWFLTKDKAGGKHPSPSSRGEPAKHSFPSSRGESAKHPSPSSGRESAKYPSPSGRGAGGEGKEGKESKRDRRREFLFIDARNLGYMRDRVLRDFTLDDIAKIADTFHAWQRIPPLPLGESRGKGQTPPKLLRFARELRKNQTDGENLLWQLLRNRQMANAKFRRQQPIEDYIADFYCHEHRLVVELDGSQHLTPEGRQRDARRTQRLQEIGIQVLRFNNRQVLTETEGVLESIYNTLTLSLTQTLSQRERASTPRVTLPRGDDRGSEAIPAGENQHILPAGEGQQNTPLPLTGESQQNTPLPLTGESQRNTPLPLAGEGQQNTPLPLGEGPGVRAKSAKRATTYQDIPGFCKSVSLDDIKKHDFVLTPGRYVGAPEQEDDGEPFAEKMMRLTEQLREQFAESDRLEAEIKRNLGRLGYEL GT:EXON 1|1-849:0| BL:SWS:NREP 2 BL:SWS:REP 103->437,505->539,773->848|T1MH_HAEIN|e-126|67.0|432/443| BL:SWS:REP 563->663|Y925_HAEIN|2e-23|44.6|101/121| PROS 717->730|PS00300|SRP54|PDOC00272| PROS 741->754|PS00300|SRP54|PDOC00272| NREPEAT 1 REPEAT 2|710->733|734->756| SEG 483->503|grgaggegkegkeskrdrrre| SEG 665->676|tltlsltqtlsq| BL:PDB:NREP 3 BL:PDB:REP 43->101|3gwjA|6e-04|44.1|59/674| BL:PDB:REP 160->435|2okcB|4e-18|27.5|262/415| BL:PDB:REP 571->662|3hrlA|2e-10|46.9|81/91| RP:PDB:NREP 4 RP:PDB:REP 11->96|2ar0A|8e-06|20.7|86/476| RP:PDB:REP 146->443|3clbC|1e-26|10.0|280/510| RP:PDB:REP 555->662|1cw0A|9e-08|24.8|105/155| RP:PDB:REP 777->848|2dulA|1e-05|11.8|68/367| RP:PFM:NREP 3 RP:PFM:REP 12->161|PF12161|3e-15|47.1|104/129|HsdM_N| RP:PFM:REP 200->437|PF02384|7e-53|46.7|227/273|N6_Mtase| RP:PFM:REP 580->662|PF04480|1e-21|53.0|83/92|DUF559| HM:PFM:NREP 5 HM:PFM:REP 199->438|PF02384|4.5e-102|48.1|231/311|N6_Mtase| HM:PFM:REP 496->541|PF02384|8.9e-08|37.0|46/311|N6_Mtase| HM:PFM:REP 772->809|PF02384|2e-08|39.5|38/311|N6_Mtase| HM:PFM:REP 559->666|PF04480|5.5e-40|51.9|106/109|DUF559| HM:PFM:REP 12->180|PF12161|7.2e-30|42.5|120/132|HsdM_N| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF02384|IPR003356| GO:PFM GO:0006306|"GO:DNA methylation"|PF02384|IPR003356| GO:PFM GO:0008170|"GO:N-methyltransferase activity"|PF02384|IPR003356| RP:SCP:NREP 2 RP:SCP:REP 186->438,773->849|2ar0A1|8e-23|21.2|322/485|c.66.1.45| RP:SCP:REP 555->664|1cw0A|5e-15|24.3|107/155|c.52.1.15| HM:SCP:REP 10->848|2ar0A1|6.3e-128|37.8|482/0|c.66.1.45|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1081 OP:NHOMOORG 573 OP:PATTERN ----1--------1-----------1---1---1132--31121211113238-1-----11-----1 11---113---2-4-1-11-12--1-11111-12121-1--432-3-22----111----1-1-3-31112-----111142---1--1223--1-----11-32-2-1----------------142354--2-1111131--3-61414451111------322-4642--1----------21------11-----11----1-----22-----331----1-1--111-22223222222222--211---111-112--122-2-2-1--111-1---11111222222222221111111121111-431212221-3--1111-21-11-1---1-1-----31132--12-1223111-111--2163344-----12212-42323741111111111------12-12-2111112325-12212-15----12-12133333333---1------------------121-2-----------3-24-2---1---------------1-1--1-111-1--1-411113--22415--61311-1222211241-22111281--5-1321--2237-1733-1-1-11--111-11211-11333332331-1-55-1415--1-1--43-512-5-12-2--5-1--16213-------1-45-22111211131-111122211211222222122-1221-11111-2122--1-1-222-2121------2----112---------24-341211333113-43447-21----121132121-2---1-11-1-521-221112212122221115131114--333432223222--11--1111--------2-2------2--121----2-113-1111-2-1------21 -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 601 STR:RPRED 70.8 SQ:SECSTR ##########HHHHHHHHHHHHHHTTccTTcHHHHHccGGGGccccccccccccEEETTHHHHHTccHHHHHHHHHHHHHEEEcTTTcHHHHHHHHHHHcccccEEEccccTTTT#################cccccTTTcHHHHTTTTccccccEEEEEcEEEcccccccccHHHHHHHHHHHHcccccccccccccEEEEEEEHccHHHHHHHHHccGGGcccTTEEEEEEcccccHHHHHccccccccccEEEEcccHHHTTcTTTTTTEEEEEEEEcHHHHHHHTcTTGGGGEHEEEEEEEEccccccccEcTTccEEcccccTTcTTTTTccEEEEEEcccEEcccccccEEEEEEEEEccHHHHHHHHHHHHEEEEEHHHHcEEEEcccccEEEEEEEEEEEccTTcccccccccHHHHHHHHHHHHTTcccTHHHH###############################################################################################################cHHHHHHHHHTccccccHHHHHHHHHHHHTTTTTcccEEccTTcTTcccEEEGGGTEEEEEEcTTTTTccHHHHHHHHHHHHHHTTcEEEEEEHHHHccTTcccHHHH#############################################################################################################cccTTcTTcEEcccGGGTTccTTGGGccEEEEEHHHEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcc# DISOP:02AL 1-8, 216-218, 542-563, 668-689, 699-752, 764-766, 769-771| PSIPRED ccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHccccccHHHHccccEEEEEEccHHHHHHHHHHHHHcccccccEEEEccccccccccccccEEEEEccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccEEEEEEcccEEEcccccHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEEEccccccccccHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHccHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccEEcccEEEEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccEEEccHHHHHHcccEEccccccccHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //