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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58309.1
DDBJ      :             conserved hypothetical protein, DedA-like
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  83/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:249 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   105->194 3cerC PDBj 4e-05 5.7 %
:RPS:PFM   101->201 PF09335 * SNARE_assoc 9e-16 45.0 %
:HMM:PFM   85->202 PF09335 * SNARE_assoc 4.5e-29 37.3 118/123  
:BLT:SWISS 36->232 YDJZ_ECOLI 1e-21 25.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58309.1 GT:GENE ABA58309.1 GT:PRODUCT conserved hypothetical protein, DedA-like GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2090377..2091126) GB:FROM 2090377 GB:TO 2091126 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein, DedA-like GB:PROTEIN_ID ABA58309.1 GB:DB_XREF GI:76883628 InterPro:IPR000252 LENGTH 249 SQ:AASEQ MNSLFQKIHHISRKKPLITFSVGIILIFIGLYFFWPSLHDSINRFFNILFSGDREKLHDFVEQFGFWGPIIIILSMVAQMFLVVIPSVVIFVVSILAYGSFWGGTVALIAVLVASTVGYFVGRWLGPITVDKLIGLKTRHKIEGYVERYGFWTVIVIRFSPFLSNDAISFVGGLLRMNYWRFMAATFIGILPLIVLLAYLGETNERLRTGMFWVSIISLIVFIAYIIYDHRRGDDSSTRVKQRNSVQKR GT:EXON 1|1-249:0| BL:SWS:NREP 1 BL:SWS:REP 36->232|YDJZ_ECOLI|1e-21|25.9|197/235| TM:NTM 6 TM:REGION 16->38| TM:REGION 72->94| TM:REGION 101->123| TM:REGION 152->174| TM:REGION 181->203| TM:REGION 208->230| SEG 23->34|giilifiglyff| SEG 81->96|flvvipsvvifvvsil| RP:PDB:NREP 1 RP:PDB:REP 105->194|3cerC|4e-05|5.7|87/326| RP:PFM:NREP 1 RP:PFM:REP 101->201|PF09335|9e-16|45.0|100/119|SNARE_assoc| HM:PFM:NREP 1 HM:PFM:REP 85->202|PF09335|4.5e-29|37.3|118/123|SNARE_assoc| OP:NHOMO 107 OP:NHOMOORG 85 OP:PATTERN ------------------------------1-----------1------------------------- 1---------------------------------------------------------------------------------11-1-------------1---21-----------------------------------------2---------------------1--------------11--------------------------------------21---------------------------1----------------------------------------------------------------------12-1-3333333-3------111----2-----11-111-------1-------------------------------------------------------------------------1----1--------------------------------------------------------------1-------------------------------------------------------------1-1-------------------------1----------------------2--------------------------------------1-------------1--1111111111-1111111111111111111111----------------------1111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 87 STR:RPRED 34.9 SQ:SECSTR ########################################################################################################EEEEEcHHHHHHHHHTcccccHHHHTTcEE###EHHHHHHHHHHHHTcHHHHTTcTTccTTTTTTHHHHHHHHHHHHHHHHHHHHHHHcc####################################################### DISOP:02AL 1-4, 237-249| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccc //