[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58311.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.47.1
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   229->303 2sfaA PDBj 2e-06 40.8 %
:HMM:SCOP  145->335 2sfaA_ b.47.1.1 * 5.3e-18 26.7 %
:HMM:PFM   248->316 PF08192 * Peptidase_S64 0.00011 32.3 65/695  
:BLT:SWISS 229->303 SFAS2_STRFR 5e-06 40.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58311.1 GT:GENE ABA58311.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2092754..2093794 GB:FROM 2092754 GB:TO 2093794 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58311.1 GB:DB_XREF GI:76883630 InterPro:IPR001316 LENGTH 346 SQ:AASEQ MKKDEKKMVLSPTDIASAQKAYSAVVGSFLDPRKQLANVIGMGIGVKWTKGEPTGKPALVVLVTQKLAKNELSPSNMVPNKLQEMQTDVLAIGYPLAGQAKTSIQTLGNRVRPAEGGYSVGHKDITAGTIATCVYDILPEGSVSPPSQGIGIPSNYYLLSNNHVLANSNAASLGDSILQPGPYDGGTDPADRIASLSRFIPITFDPPVPQGDHNNLVDAAIAQVEFQDADRKIYWIGDVRGWRQKRDVAVGMPVKKTGRTTHFTMGRITAINATVNVGYGGGKVARFRDQIITTPMSAGGDSGSLVTTLDNIAVGLLFAGSSVATIVNQIENVRSLLRVEVAEQIL GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 229->303|SFAS2_STRFR|5e-06|40.8|71/174| BL:PDB:NREP 1 BL:PDB:REP 229->303|2sfaA|2e-06|40.8|71/191| HM:PFM:NREP 1 HM:PFM:REP 248->316|PF08192|0.00011|32.3|65/695|Peptidase_S64| HM:SCP:REP 145->335|2sfaA_|5.3e-18|26.7|161/0|b.47.1.1|1/1|Trypsin-like serine proteases| OP:NHOMO 18 OP:NHOMOORG 16 OP:PATTERN --------------------------------------------------1----------------- --------------------------------------------11------------------1---------------------------------------------------------------11----------------------1------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------1--211-1--1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 93 STR:RPRED 26.9 SQ:SECSTR ####################################################################################################################################################################################################################################cccEEEccccEEEccEEccccTTcEEEEEETTTEEEEEEEEEEEEEEE##ccTTcEEEEEEEEEEcccccTTcTTcEEEcTTccEEEEEEEEccc####################### DISOP:02AL 1-16, 103-119| PSIPRED cccccccEEEcHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEEEccEEccccEEEEEEEEcccHHHccHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHccccccccccccEEEccEEEEEEEEEEccccccccccccccccccEEEEEccEEEEccccccccccccccccccccccHHHHHHHHHEEcccccccccccccccEEEccccccccEEcccccEEEEEEEccccccccccccEEEEEEccccEEEEEEEEEEEEEEEEEcccccEEEEccEEEEEEEccccccccccccccccEEEEEEEcccccEEHHHHHHHHHHHHHHHHHHcc //