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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58341.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.3.2b.3.5
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   216->280 3e8vA PDBj 8e-04 15.6 %
:RPS:SCOP  215->290 1ti2B1  b.3.5.1 * 1e-07 16.0 %
:HMM:SCOP  216->292 1uwyA1 b.3.2.1 * 7.4e-14 43.4 %
:HMM:PFM   159->219 PF03420 * Peptidase_U9 0.00086 26.2 61/213  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58341.1 GT:GENE ABA58341.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2131308..2132189) GB:FROM 2131308 GB:TO 2132189 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA58341.1 GB:DB_XREF GI:76883660 LENGTH 293 SQ:AASEQ MITHLDNLLRHLFIATIDEITDETQVRFQPPDEDWRAYVSNLIVDGQPANALNVYMIDMRENRKLRSNERTRDIQNGTVIEIPAPFRLDCHYVITAWSPAQVSQAVEPAVDEHALLYKATAALTNNEPLVPRMVYAPNPLPETFPKSIADAELPTALLPVEGFPKYAEFWGTMGVNHRWKPAIYLTVTLPVIYASQIAGPMVTKRTSKVNDETWVQIAGRIFNPVGESIPDALVDILDTGLRTTSDSEGRYSFVRVPVGTRNIRVVAVGFQPETKPVLVPGVLENYDITLTPL GT:EXON 1|1-293:0| RP:PDB:NREP 1 RP:PDB:REP 216->280|3e8vA|8e-04|15.6|64/82| HM:PFM:NREP 1 HM:PFM:REP 159->219|PF03420|0.00086|26.2|61/213|Peptidase_U9| RP:SCP:NREP 1 RP:SCP:REP 215->290|1ti2B1|1e-07|16.0|75/79|b.3.5.1| HM:SCP:REP 216->292|1uwyA1|7.4e-14|43.4|76/0|b.3.2.1|1/1|Carboxypeptidase regulatory domain-like| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 64 STR:RPRED 21.8 SQ:SECSTR #######################################################################################################################################################################################################################EEEEEEEcTTccccTTcEEEEEEEEEEEEccTTcEEEEEccc#EEEEEEEEETTEEEEEEEEETT############# DISOP:02AL 66-75, 104-107| PSIPRED cEEHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHccHHcccccccEEEEEEEEEEccccccccccccccccccEEEccccEEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccHHHccccccccccccccccccccccEEEcccccHHHHHHHHHHccccccccEEEEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEEccccccccHHEEEEEccccccccccccEEEEEEccccEEEEEEEEcccccccccEEEcccccEEEEEEEcc //