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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58359.1
DDBJ      :             Methylmalonyl-CoA mutase-like
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  286/915 : Eukaryota  75/199 : Viruses  0/175   --->[See Alignment]
c.1.10c.1.19c.23.6c.37.1
:1139 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->146,574->706,773->1136 3bicA PDBj 1e-48 34.6 %
:BLT:PDB   198->340 2qm8B PDBj 5e-14 35.3 %
:RPS:PDB   19->154,600->706,773->1137 1e1cA PDBj 2e-42 28.8 %
:RPS:PDB   197->364 1cp2A PDBj 2e-05 12.1 %
:RPS:SCOP  39->128 1j2wA  c.1.10.1 * 6e-04 20.5 %
:RPS:SCOP  169->411 2p67A1  c.37.1.10 * 4e-28 25.8 %
:RPS:SCOP  773->1135 1e1cA1  c.1.19.1 * 1e-33 29.1 %
:HMM:SCOP  5->152 7reqA2 c.23.6.1 * 2.9e-38 31.5 %
:HMM:SCOP  195->362 1xjcA_ c.37.1.10 * 2.7e-20 30.2 %
:HMM:SCOP  513->1136 7reqA1 c.1.19.1 * 2.7e-133 36.6 %
:RPS:PFM   30->128 PF02310 * B12-binding 4e-11 37.1 %
:RPS:PFM   171->411 PF03308 * ArgK 1e-40 42.6 %
:RPS:PFM   576->705,773->1134 PF01642 * MM_CoA_mutase 7e-65 41.3 %
:HMM:PFM   575->706 PF01642 * MM_CoA_mutase 3.6e-17 35.9 128/516  
:HMM:PFM   771->1133 PF01642 * MM_CoA_mutase 1.8e-73 36.7 357/516  
:HMM:PFM   189->396 PF03308 * ArgK 4.2e-45 38.5 200/267  
:HMM:PFM   21->121 PF02310 * B12-binding 4.1e-17 25.7 101/121  
:BLT:SWISS 21->131,578->708,773->1128 MUTA_CAEEL 9e-49 33.7 %
:BLT:SWISS 170->349 Y274_PYRHO 2e-26 39.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58359.1 GT:GENE ABA58359.1 GT:PRODUCT Methylmalonyl-CoA mutase-like GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2158137..2161556 GB:FROM 2158137 GB:TO 2161556 GB:DIRECTION + GB:PRODUCT Methylmalonyl-CoA mutase-like GB:PROTEIN_ID ABA58359.1 GB:DB_XREF GI:76883678 InterPro:IPR005129 InterPro:IPR006099 InterPro:IPR006158 InterPro:IPR006159 LENGTH 1139 SQ:AASEQ MAIPIRHQTKTLSRTAQLPLRFITATSLFDGHDAAINIIRRMLQDQGVEIVHLGHNRGVEEIVRAALQEDADGIAISSYQGGHLEFFRYLVDQLRTQGREDMLVFGGGGGTITPAEARELEIYGVEKIYLPQEGALQGLEGIIQDIMARTRRARQPPTFPKKIMLQESAAIGQALSLVEAGQWQSPIIVTGKAHIPVIGLTGTGGAGKSSLLDELLHYFLKSFPDLHLAVLALDPTRHRTGGALLGDRIRLNSLADPRIYLRSLATRSRHGVTSSSLPKLVSLLKSVGFDLILIETAGAGQADSEIVELVDLSVYVMTSDYGAPTQLEKIEMLDCADLVVLNKFDKSGSQDALRDIRQQWRRNHLAFSLPDEQVPVYATVASEFNNPGIAKLFSALCQKLAERYPEKAQKWQAALAPSVPSSGQKGIISFRRIHYLAEISEQGRHIRNGINKQVKAASQAQSHYKSLQALTDPHLPPPLAHYAQKILAENPEDSLSQLRQHYEEALEQLTEEALEHLRHWPETRRRLTNEYYTYSVRGQEIQGENYYKSLSHLRIPKVALPRCQDWGEILRFLLEENVPGEYPFTAGLYPYRRTTEELARMFAGEGTPERTNRRFHYLVRGQPSIRLSTAFDPIVLYGEDPAPQPDVFGRIGMSGVSVASLDDFKKLFSGFDLCQPNVSVSMTINGPAPMLLAWFFHTAIDQQVEKCLRRQGKWKAAQQRIKVFYRDQPRPRYGGDLPSGHDGLGLGLLGVSGEQLLPREHYEQIRADVLRHIRGTVQADILKEEQAQNECIFTTEFGLRLMGDIQEYFIAHQIRHYYSVSVSGYHIAEAGANPITQLAFTLANGFTLVEYYLSRGMAIDDFAPQMSFFFSNALDPEYAVIGRVARRIWARAMRERYGASPRSQMLKYHIQTSGRSLQAQEINFNDIRTTLEALYAIYDNCNSLHTNAYDEAVTTPTEESVRRALAIQLIINRELGLNYNQNVLQGSFLIQELTRLVEEAVYQELNRLSERGGVLGAMETNYQRNKIQEESLYYESRKHDGNLPIVGVNIFPSLRPEKTLLSGQLTRSSKEEKQAQVEAVELFKHRQAAQAEAALAQLQQVVRRGGNSFEALMRTVQHCTLGQITHALYGVGGQYRRRM GT:EXON 1|1-1139:0| BL:SWS:NREP 2 BL:SWS:REP 21->131,578->708,773->1128|MUTA_CAEEL|9e-49|33.7|588/744| BL:SWS:REP 170->349|Y274_PYRHO|2e-26|39.8|176/317| SEG 274->287|ssslpklvsllksv| SEG 503->517|eealeqlteealehl| SEG 734->757|ggdlpsghdglglgllgvsgeqll| SEG 1087->1100|qaaqaeaalaqlqq| BL:PDB:NREP 2 BL:PDB:REP 5->146,574->706,773->1136|3bicA|1e-48|34.6|624/715| BL:PDB:REP 198->340|2qm8B|5e-14|35.3|136/312| RP:PDB:NREP 2 RP:PDB:REP 19->154,600->706,773->1137|1e1cA|2e-42|28.8|594/727| RP:PDB:REP 197->364|1cp2A|2e-05|12.1|157/269| RP:PFM:NREP 3 RP:PFM:REP 30->128|PF02310|4e-11|37.1|97/117|B12-binding| RP:PFM:REP 171->411|PF03308|1e-40|42.6|235/265|ArgK| RP:PFM:REP 576->705,773->1134|PF01642|7e-65|41.3|483/503|MM_CoA_mutase| HM:PFM:NREP 4 HM:PFM:REP 575->706|PF01642|3.6e-17|35.9|128/516|MM_CoA_mutase| HM:PFM:REP 771->1133|PF01642|1.8e-73|36.7|357/516|MM_CoA_mutase| HM:PFM:REP 189->396|PF03308|4.2e-45|38.5|200/267|ArgK| HM:PFM:REP 21->121|PF02310|4.1e-17|25.7|101/121|B12-binding| GO:PFM:NREP 5 GO:PFM GO:0031419|"GO:cobalamin binding"|PF02310|IPR006158| GO:PFM GO:0046872|"GO:metal ion binding"|PF02310|IPR006158| GO:PFM GO:0008152|"GO:metabolic process"|PF01642|IPR006099| GO:PFM GO:0016866|"GO:intramolecular transferase activity"|PF01642|IPR006099| GO:PFM GO:0031419|"GO:cobalamin binding"|PF01642|IPR006099| RP:SCP:NREP 3 RP:SCP:REP 39->128|1j2wA|6e-04|20.5|88/212|c.1.10.1| RP:SCP:REP 169->411|2p67A1|4e-28|25.8|209/301|c.37.1.10| RP:SCP:REP 773->1135|1e1cA1|1e-33|29.1|361/559|c.1.19.1| HM:SCP:REP 5->152|7reqA2|2.9e-38|31.5|146/168|c.23.6.1|1/1|Cobalamin (vitamin B12)-binding domain| HM:SCP:REP 195->362|1xjcA_|2.7e-20|30.2|162/0|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 513->1136|7reqA1|2.7e-133|36.6|547/557|c.1.19.1|1/1|Cobalamin (vitamin B12)-dependent enzymes| OP:NHOMO 1070 OP:NHOMOORG 393 OP:PATTERN 33----3333333332-------334433-44----------------------2223333222--32 44655-22222-2-25622-242244222225455532223567---2------------55C23338763-----------4-----22222322---4-33434-234---------------2122322223266666---43-------------------------------------55544----4-----------------4-------4443---------41-------------------------------------------------------------------------------------------33-------------------------5--3-33333--31-335-3--4--2331-----1122222-222231111111-111-33333333123-111111111241494212333366233-------------425------------------------------1111------------1------12-------1111412211135222233322--5----------------5331933-----------3242636-7445445-3------------------------------------------------------------1----------------2221211122-22122--2212-222222----------2---------------1112222--2-----------------------------------------------------------------------------------------------------------------2-666466------------------------------------33333-3----33 ----121-42----1--------------------------------------------------------------------------------------------2414122222211112223131282-2341-123-123121212212113144312322-----1331--------2---1----2221221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 960 STR:RPRED 84.3 SQ:SECSTR ####HHHHHHHHHHHcccccEEEEEccTTccccHHHHHHHHHHHHTTcEEEEccTTccHHHHHHHHHHTTccEEEEEEccccHHHHHHHHHHHHHHTTcTTcEEEEEcccGGGHHHHHHTTEEEEcTTccHHHcHHHcTHHHHHHHHHHHHHHH######HHHHTTcHHHHHHHHHHHHcccHHHHHHHHHHHHGcEEEEEEcTTccHHHHHHHHHHHHHTTTTTccEEEEEEcTTccccHHHHTccccccHHHHHHHHGGGccHHHHcEEcGcGGGcEEEEGGcEEEEcccccTTcccHHHHHHHHHHHcEEEEEEEcccccTTTTHHHHTTcccEEEEEEcccHHHHHHHHHHHHHHHHHcTEEEEcccHHHHHHHcHHHHccccHHHHHHHHHHHHHHHccccccccccccccHHHHHGGGGTc#####################################################################################################################HHHHHHHHHHGGGcGGGGGccHHHHHHHHccHTccGGGcHHHHHHHHHHHTccEEccEEccccHHHHHHHHHHHHHTcccEcEEEEccHHHHTTccTTccTTTGGGTTccccccccHHHHHHHcTTccTTTTHcEEEEEccTTHHHHHHHHHHHHHHHTccG##################################################cGGGcEEEEccccHHHcEEEEcccHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHcTTEEcEEEEcHHHHHHTccHHHHHHHHHHHHHHHHHHHHHTTccGGGTGGGEEEEEEEcccHHHHHHHHHHHHHHHHHHHTTccccGGGGcccEEEEEccTTcccccTTHHHHHHHHHHHHHHHHTccEEEcccTTTTTccccHHHHHHHHHHHHHHHHTccccccccTTTTcHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHTTHHHHHHHHHHHHHHHHHHHTcccccTTTccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccGGcHHHHHHHHHHTccHHHHHHHHHHHHccccc## DISOP:02AL 11-16, 148-167, 489-492| PSIPRED cccccHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHcccccccHHHHcccccEEEEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHccccEEEEEEEccccHHHHHHcccccEEccEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccEEccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEccHHHccccccccccccccccccccccccHHHHHHHHHccccccccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //