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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58363.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:575 amino acids
:PSIPRED
:RPS:SCOP  481->504 1eb7A2  a.3.1.5 * 5e-04 33.3 %
:HMM:SCOP  316->575 1eb7A2 a.3.1.5 * 1.1e-14 25.9 %
:HMM:PFM   336->364 PF00034 * Cytochrom_C 0.00019 41.7 24/91  
:BLT:SWISS 40->575 Y4IJ_RHISN 1e-45 33.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58363.1 GT:GENE ABA58363.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2166124..2167851 GB:FROM 2166124 GB:TO 2167851 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58363.1 GB:DB_XREF GI:76883682 LENGTH 575 SQ:AASEQ MKIKCIFWKNVTFALTILTPLPLLAEATSAPVAIDQGAEWTASAQKDFYSRDQGSRIMPLRWMAALKQPNGEPFMAASLSRYGYLPNEDSNPPGLPVGFTVASGSDGQYIGMTCAACHTRQIEVAGTFYRIDGGPAIADFQSFLADLDTAVNTILTDQQAFKNFAHAVLGPSPTTSEENKLHEAVQTWYLPYHTLMEGALPPSPWGPARLDAVSMIFNRLTGLDIGPPPTYMIPENIKPATAPVRYPFLWNAAIQDKTQWPGFADNGNNILGLARNLGEVYGVFGVFHPKKDKWRLLGINYLANNSANFQGLNALENLVRKIGPPKWPWEVDQALASKGKEVFERKAEQGGCIGCHGIKPGETRFLNQKTWATPIQDVGTDSKEYEILGWTVKTGVLEGAKIPFLAEPLKPVDTAFNVLGTSVIGSILQHYVPVLMKSEEHAKTEGKRPLFTPETEDLKGAFRMPTLATATPTYAYESRVLQGIWAAAPYLHNGSVPTLAELLKPAAERVRSFKVGPAYDLVDIGLAVEQTQFDYTLETTDCSDRNSGNSRCGHEFGTQLSADEKKALLEYLKIL GT:EXON 1|1-575:0| BL:SWS:NREP 1 BL:SWS:REP 40->575|Y4IJ_RHISN|1e-45|33.5|487/596| SEG 12->31|tfaltiltplpllaeatsap| SEG 465->476|ptlatatptyay| HM:PFM:NREP 1 HM:PFM:REP 336->364|PF00034|0.00019|41.7|24/91|Cytochrom_C| RP:SCP:NREP 1 RP:SCP:REP 481->504|1eb7A2|5e-04|33.3|24/153|a.3.1.5| HM:SCP:REP 316->575|1eb7A2|1.1e-14|25.9|135/159|a.3.1.5|1/1|Cytochrome c| OP:NHOMO 64 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- --1-----------------------------------------------------------------------------------------------------------------------------------------------213----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------121111-----1-------------------1-------1--11-----1------------1----------------------------------------------------------------------------------1-----1------------------1---------11-22-----------------------------1----------------------------------2---------------------------4-----------------------------------------------------------------------------------------------------------3----------------------------24434-1211----1---------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccEEEEEEEHHHHHHHHHcccccccccccccEEEcccccccHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccEEEEcccccccEEEEEHHHccccEEEEccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHccccccHHHcccccccccccccccccHHHHEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccHHcccccccccccccccEEEccHHHHcccHHHHHHccccccccHHccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHcccccHHccccccHHHHHccHHHccEEEEcccccccccccEEEcccccccEEccEEccccccccccccccccccccHHHHHHHHHHHHHc //