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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58376.1
DDBJ      :             Phospholipase D/Transphosphatidylase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  93/915 : Eukaryota  53/199 : Viruses  0/175   --->[See Alignment]
d.136.1
:714 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   233->340 3do9B PDBj 5e-11 16.7 %
:RPS:SCOP  131->214 1f0iA1  d.136.1.2 * 3e-08 26.5 %
:RPS:SCOP  222->406 1xdoA3  d.136.1.4 * 3e-08 12.1 %
:HMM:SCOP  4->242 1f0iA1 d.136.1.2 * 3.3e-35 24.6 %
:HMM:SCOP  251->432 1f0iA1 d.136.1.2 * 3.3e-22 23.0 %
:RPS:PFM   130->154 PF00614 * PLDc 7e-06 60.0 %
:RPS:PFM   393->477 PF08521 * 2CSK_N 5e-04 29.8 %
:HMM:PFM   548->663 PF09335 * SNARE_assoc 2.4e-25 36.2 116/123  
:HMM:PFM   129->150 PF00614 * PLDc 7.4e-09 63.6 22/28  
:HMM:PFM   350->373 PF00614 * PLDc 7.9e-06 33.3 24/28  
:BLT:SWISS 18->305 PLD2_MOUSE 5e-15 31.7 %
:BLT:SWISS 549->644 Y1528_MYCBO 2e-09 32.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58376.1 GT:GENE ABA58376.1 GT:PRODUCT Phospholipase D/Transphosphatidylase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2188359..2190503 GB:FROM 2188359 GB:TO 2190503 GB:DIRECTION + GB:PRODUCT Phospholipase D/Transphosphatidylase GB:PROTEIN_ID ABA58376.1 GB:DB_XREF GI:76883695 InterPro:IPR000169 InterPro:IPR001736 LENGTH 714 SQ:AASEQ MISLFKPGNNCWRLEQATRAAFLIDGAAYFKAFRSAVEQAEHSILILGWDINSQLRLVRNEPSDSLPETLADLLNTVVSRRRRLQAHVLCWDFAMIYALEREWLPIYQLNWRTHHRLHFEMDDQHPVGASHHQKVVVIDDTVAFAGGLDLSKWRWDTPEHRPDDERRIDSEGNPYPPFHDVQMVVEGPAAAALGDLARERWYRATGRRLSPPPASSTHGTPWPRKVAPNLENISIAIARTEPKFKNYPEIREVERLYLDTIAAAQRFIYIENQYLSACKIKEALAARLQEPKGPEVILILPLKTGGWLEQNTMDILRWRVLEALVNIDKYDRLRVYCPVTSGINNQCIMVHAKVLIVDDMLVRIGSSNLSNRSLGLDTECDLALEAGDNYSIAATIAEFRNRLLGEHLNVEPQQVAQATIQQDSLIKAIEKLRGPGRTLNVFEAHTPPKGHDWLPDARFIDPECSIDPDQFANQIIPPEQRQPASRQLIFRALMLIIPLALAAAWRWTPLGEWLDLQTAVSIIKELKESPEAPLLLLGVYLLASLIAIPLTLLIVATVLIFGSLTGFAYALISATLSALLTYGVGRLFGRRTVRRLAGKRLNRLSRRLAQQGTLTMLAVRLIPIAPFTVVNMVAGASHIRFRDFIIGTVLGLIPGILGIALFIDRVVATIRDPTPLSFAILGVLLMLLGLSLLGVRWWLRKQDATNNDKTLKTS GT:EXON 1|1-714:0| BL:SWS:NREP 2 BL:SWS:REP 18->305|PLD2_MOUSE|5e-15|31.7|278/933| BL:SWS:REP 549->644|Y1528_MYCBO|2e-09|32.3|96/252| TM:NTM 6 TM:REGION 485->507| TM:REGION 535->557| TM:REGION 567->589| TM:REGION 613->635| TM:REGION 645->667| TM:REGION 676->698| SEG 365->376|gssnlsnrslgl| SEG 492->504|almliiplalaaa| SEG 534->545|llllgvyllasl| SEG 568->582|ayalisatlsallty| SEG 645->663|iigtvlglipgilgialfi| SEG 681->700|lgvllmllglsllgvrwwlr| RP:PDB:NREP 1 RP:PDB:REP 233->340|3do9B|5e-11|16.7|108/177| RP:PFM:NREP 2 RP:PFM:REP 130->154|PF00614|7e-06|60.0|25/28|PLDc| RP:PFM:REP 393->477|PF08521|5e-04|29.8|84/146|2CSK_N| HM:PFM:NREP 3 HM:PFM:REP 548->663|PF09335|2.4e-25|36.2|116/123|SNARE_assoc| HM:PFM:REP 129->150|PF00614|7.4e-09|63.6|22/28|PLDc| HM:PFM:REP 350->373|PF00614|7.9e-06|33.3|24/28|PLDc| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00614|IPR001736| GO:PFM GO:0008152|"GO:metabolic process"|PF00614|IPR001736| RP:SCP:NREP 2 RP:SCP:REP 131->214|1f0iA1|3e-08|26.5|68/256|d.136.1.2| RP:SCP:REP 222->406|1xdoA3|3e-08|12.1|165/187|d.136.1.4| HM:SCP:REP 4->242|1f0iA1|3.3e-35|24.6|203/0|d.136.1.2|1/2|Phospholipase D/nuclease| HM:SCP:REP 251->432|1f0iA1|3.3e-22|23.0|178/0|d.136.1.2|2/2|Phospholipase D/nuclease| OP:NHOMO 199 OP:NHOMOORG 146 OP:PATTERN -------------------------------------------------------------------- ----1----------11----1---1------1222-111-1------------------11--1-1-------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------2221------------------------------2212111-1-1----111111211--11-2111111-----------------11-------------------------------111------122111-----11-11-11---1-1111-------------------11-11----------111----1-----------111----------11--------------------------------1----1------------------------21-----------------------------------------------------------------------------------------------------------1----------------------------11-1-------------------------------------------------------------------------------------------------------------- ----22--------------------------------------------------1------11-----1-1-------1-------------------1--23-11-221-121-1--111-3--4-441-4221--11-111-1--11--1---11-----1--------1------------238-3---1222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 332 STR:RPRED 46.5 SQ:SECSTR #############################HHHHTTTccTTccEEEEEEcccc###########GGGTTTTHHHHH##HHHHTTcEEEEEEEcccccccccHHHH#####HHHHHTTcEEEEEEcccccccEEEEEEETTEEEEEEEcccccTTTT###TTccEEEEEEcHH###########HHHHHTccHHHHHHHHTTcccEEEEcTTccTTcGGGGGccc#########EEccccccccEEEEccEEccHHHHHHHHHHcccccEEEEEEccccTTcHHHHHHccccTTccccccTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHcEEEEccccccccEEEETTTEEEEEcccccHHHHHTccEEEEEEE##ccHHHHHHHHHHHHHHH###################################################################################################################################################################################################################################################################################################################### DISOP:02AL 705-714| PSIPRED cccEEcccccccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHEEEccEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHccHHHccHHHccccEEEEccccccccccccEEEEEcccEEEEccccccccccccHHHHccccccccccccccccEEEEEEEEEcHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHEEEEEccccccHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEcccEEEEEcccccHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccHHHcccHHcccccccccHHHHHHHHccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccc //