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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58404.1
DDBJ      :             Polysaccharide biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  187/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:491 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   15->274 PF01943 * Polysacc_synt 3e-11 25.3 %
:HMM:PFM   13->274 PF01943 * Polysacc_synt 7.4e-32 19.5 261/273  
:BLT:SWISS 17->340 TUAB_BACSU 2e-22 21.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58404.1 GT:GENE ABA58404.1 GT:PRODUCT Polysaccharide biosynthesis protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2222474..2223949) GB:FROM 2222474 GB:TO 2223949 GB:DIRECTION - GB:PRODUCT Polysaccharide biosynthesis protein GB:PROTEIN_ID ABA58404.1 GB:DB_XREF GI:76883723 InterPro:IPR002797 LENGTH 491 SQ:AASEQ MLESKTEPGVRHSIVVTTLNRYAVLVISLVSTMVLARLLTPAEIGIFSMAVVFVNLAHSMRDFGVGRYIVQEKELTVDRIRSAFGITLGIAWSMAIVLAIAAPWVADFYGDERVTGILRVLAVNFVLIPFGSVVLSYLNREMQFTTIFLVGVISEFVRAASGIWFAWIGLGAMSLAWSALLGVIATVVLARILGPSHFILRPAFCEWRRVMSFGGRATLATIAFQFQRGAPEVVIGRYLSAAAVGFFSKALGVIRLFDRTVLSAVSPAILPHMAAKHRSGESVAGFYAHGLGLITALAWPCYAFIAIMAFPVVRILFGDQWDAAVPLARILAIYAAVDALYAFTAQALIAVGAVHLLVRLRVATLLATVLALVLAVSYGLEVVAFAMVFPAVVGLIYSSLLMRSAIGLKGRVYLKATAASLLITAATVAFPLFYLGMPAAVGQPHWQFFIISAAGGSAGWMVAVITLRHPIWDELRLLFSQARNRLWPVSS GT:EXON 1|1-491:0| BL:SWS:NREP 1 BL:SWS:REP 17->340|TUAB_BACSU|2e-22|21.7|313/483| TM:NTM 10 TM:REGION 26->48| TM:REGION 84->106| TM:REGION 116->138| TM:REGION 169->191| TM:REGION 235->257| TM:REGION 289->311| TM:REGION 329->351| TM:REGION 373->395| TM:REGION 415->437| TM:REGION 447->469| SEG 350->376|avgavhllvrlrvatllatvlalvlav| SEG 382->393|vvafamvfpavv| SEG 414->429|lkataasllitaatva| RP:PFM:NREP 1 RP:PFM:REP 15->274|PF01943|3e-11|25.3|253/274|Polysacc_synt| HM:PFM:NREP 1 HM:PFM:REP 13->274|PF01943|7.4e-32|19.5|261/273|Polysacc_synt| GO:PFM:NREP 2 GO:PFM GO:0000271|"GO:polysaccharide biosynthetic process"|PF01943|IPR002797| GO:PFM GO:0016020|"GO:membrane"|PF01943|IPR002797| OP:NHOMO 237 OP:NHOMOORG 191 OP:PATTERN -----------------------11---------1---------1----------------------- ----1---11-----------1---1------1----1-1--12-----11-11----------1-----------------------4451-5-----2-1-----2--------------------------1----11---1-1-22--------------1-223---------------1--------1---------1-------1111-1----------------------------------------------------------11---------------------------------------------------------------------1-1------------------------1--------------121--1---1--11-11-111--------2-11-133111211212--2---1-11221-----------11----1------------------------------1121-----------------------------2---------12-----11--1111--1---------111111-----1-------------2-1--1--1--11------------------------1-----2-1--2----------11-1----------1---------11---1-1111111111-11111111211112212211-------1-11111111111111111-111------------------------------1----------------------------1-------------------------------------------111111111111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-9, 490-491| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccc //