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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58412.1
DDBJ      :             Short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  460/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:246 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->222 1uznB PDBj 5e-12 30.0 %
:RPS:PDB   29->193 1dohB PDBj 4e-20 16.5 %
:RPS:PDB   166->210 3e9nD PDBj 5e-05 17.8 %
:RPS:SCOP  42->193 1pwxA  c.2.1.2 * 6e-17 14.5 %
:HMM:SCOP  5->244 1zbqA1 c.2.1.2 * 4.9e-44 31.4 %
:RPS:PFM   59->160 PF00106 * adh_short 9e-09 30.4 %
:HMM:PFM   5->169 PF00106 * adh_short 3.9e-27 28.8 160/167  
:BLT:SWISS 60->244 Y2073_MYCTU 6e-27 35.1 %
:PROS 139->167|PS00061|ADH_SHORT
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58412.1 GT:GENE ABA58412.1 GT:PRODUCT Short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2234232..2234972) GB:FROM 2234232 GB:TO 2234972 GB:DIRECTION - GB:PRODUCT Short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABA58412.1 GB:DB_XREF GI:76883731 InterPro:IPR002198 InterPro:IPR002347 LENGTH 246 SQ:AASEQ MRGPVLVLGATSAIARGTAAALARRGHSLYLGGKDESELARIAADLNIRYQVEVRYGAVDATDYAAHRRFLERVIETMGGLEGVVWAIGYLGDSIFAQTHFEETEKIIAVNFTGAVSLLGECAAYLEGKGAGFIIGLSSVAGDRGRQSNYYYGAAKGGLSLFLQGLRNRLFPAGVRVLTIKPGFVDTAMTFGLPGLFLLASPASVGERIVAALERSRDVIYVPWFWFYIMFVIRMIPEPLFKRLKL GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 60->244|Y2073_MYCTU|6e-27|35.1|185/249| PROS 139->167|PS00061|ADH_SHORT|PDOC00060| TM:NTM 3 TM:REGION 4->23| TM:REGION 181->203| TM:REGION 219->241| SEG 9->26|gatsaiargtaaalarrg| BL:PDB:NREP 1 BL:PDB:REP 59->222|1uznB|5e-12|30.0|160/226| RP:PDB:NREP 2 RP:PDB:REP 29->193|1dohB|4e-20|16.5|164/271| RP:PDB:REP 166->210|3e9nD|5e-05|17.8|45/180| RP:PFM:NREP 1 RP:PFM:REP 59->160|PF00106|9e-09|30.4|102/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 5->169|PF00106|3.9e-27|28.8|160/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 42->193|1pwxA|6e-17|14.5|152/252|c.2.1.2| HM:SCP:REP 5->244|1zbqA1|4.9e-44|31.4|236/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 808 OP:NHOMOORG 489 OP:PATTERN -----1-1----------------------2---------------1-------1-----------11 1-11222222231236677-74117588888876563657---32121----1---------1-2332122--------1--212---3321-1-----31111-3-2-21---------------1-11-1--1-1--11------211221-------1----2-11---1-1-----1--12----122-------------------22-----1-------------11111111-1111111111111---11----1------1------11111-11111-111111111111111111111111111---1111--1112222222121--11111--2-----1------1--2-1111-1---1-42211-11-21213---22112-1-1--11111-221112233131322-33233232452---111122112--------2---1222111--11111---------------111111211--22-1---2--22222222222222-1131622-11111-3221-2222111--121---------11235-2----1--11111--21-2-1-122-13--2-1------------------21112--1---2-1111-111-1--31112--1-2----11122---------21--111-111111-1111111111111--1----111---1-----------------1111111------------------11111222221------------------22222111--1---1-----11-1-1-11---------1---------11---2121111---------11223233--------2-1-------------------------211-11-111--1 -----------------1----1----221-111-1-------111---111-1---1-------1--------------------------------------1-----3-----------------------------------------------1--------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 88.6 SQ:SECSTR ##########################cEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEcEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHccccccccHHHHHHHHHHHHHTTccEEEEccccHHHHTHHccHHHHHHHHH## DISOP:02AL 246-247| PSIPRED cccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccHHHHccccccccccHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHccHHHHHHHcc //