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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58417.1
DDBJ      :             O-antigen polymerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:468 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   202->346 PF04932 * Wzy_C 4e-06 37.8 %
:HMM:PFM   203->346 PF04932 * Wzy_C 7.8e-20 27.0 141/163  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58417.1 GT:GENE ABA58417.1 GT:PRODUCT O-antigen polymerase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2239876..2241282) GB:FROM 2239876 GB:TO 2241282 GB:DIRECTION - GB:PRODUCT O-antigen polymerase GB:PROTEIN_ID ABA58417.1 GB:DB_XREF GI:76883736 InterPro:IPR007016 LENGTH 468 SQ:AASEQ MPFRDILITGVIFALLPVCFLRPWIGILVWTWISIMNPHRLTWGFAWDMPFAQLVAIAILGGMLLVRDRKSIAWTPELRLLLVLFGYMTFTTFFAWAPDAAWQQWDKVAKIFLMSYVTTILIYGKQRIYWLLLVATLSLGFYGFKGGLFTILTGGQFHVMGPPKSFLAGNNFLGLAMVMGLPLLLVFAQQEARVWFRRLLYATFALTFIAVPFTYSRGAMLGLAVVSVLLFMRWRNKALLVIMLIPILFGGLAFVPEKLFNRAESIQNYEMDASSMQRIAAWDLAWNIAIDRPLRGGGFEYEGDTARWHTYLDPKYYYVMEGAHVAHSIYFQMLGQHGFVGLSLFMIILFLTYRRLGRLKKWTLEISDLRWIGQYAWALRVGLVGYAVTGAFLNLAYFDLYYLFVVLAALLWREALSDERIASRRSATAFTGKGVRSDWHPPPRVGKGSFSSKSQSESFPEESSGRHL GT:EXON 1|1-468:0| TM:NTM 10 TM:REGION 9->31| TM:REGION 46->67| TM:REGION 76->98| TM:REGION 104->125| TM:REGION 135->157| TM:REGION 166->188| TM:REGION 199->214| TM:REGION 228->250| TM:REGION 332->353| TM:REGION 385->407| SEG 95->106|awapdaawqqwd| SEG 400->411|lyylfvvlaall| SEG 446->465|gkgsfssksqsesfpeessg| RP:PFM:NREP 1 RP:PFM:REP 202->346|PF04932|4e-06|37.8|143/159|Wzy_C| HM:PFM:NREP 1 HM:PFM:REP 203->346|PF04932|7.8e-20|27.0|141/163|Wzy_C| OP:NHOMO 32 OP:NHOMOORG 32 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------1---1--1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------1------1------------------------------111------------------------------------------------1----11------------111111-----------------1---1-1----1-----------------------------------1---------------------------111-------------------------------------------------------------------------------------------------------------------------------------------------------------------111------11------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 444-468| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccEEEEcccHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccc //