[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58418.1
DDBJ      :             AMP-dependent synthetase and ligase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  792/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->524 1amuA PDBj 2e-31 28.9 %
:RPS:PDB   11->529 2d1tA PDBj 4e-67 21.5 %
:RPS:SCOP  11->524 1md9A  e.23.1.1 * 4e-72 21.3 %
:HMM:SCOP  10->529 1pg4A_ e.23.1.1 * 2.3e-155 39.5 %
:RPS:PFM   36->449 PF00501 * AMP-binding 6e-57 38.0 %
:HMM:PFM   36->460 PF00501 * AMP-binding 4.4e-106 34.7 409/418  
:BLT:SWISS 17->524 LCFB_BACSU 4e-54 29.6 %
:PROS 179->190|PS00455|AMP_BINDING
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58418.1 GT:GENE ABA58418.1 GT:PRODUCT AMP-dependent synthetase and ligase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2241402..2243018 GB:FROM 2241402 GB:TO 2243018 GB:DIRECTION + GB:PRODUCT AMP-dependent synthetase and ligase GB:PROTEIN_ID ABA58418.1 GB:DB_XREF GI:76883737 InterPro:IPR000873 LENGTH 538 SQ:AASEQ MSRIHSANSLVHSLVLDNALKGPDASALVHGDQTLTYASLGETVEACARGLLALGLASSERVAIYLPKRPETVVTLFGAAAAGGVFVPINPLLKPRQVAHILRDCNVRVLVTASNRIDFLQDALAECHDLRSLVIVDAPTQTIEKLAQPMAISWERLLSLGTTQQSPGHRRIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVAQYLENNSNDRLLAVLPLSFDAGFSQLTTAFSVGASVVLMEYLLPKDVIKSITRHGITGITAVPPLWVQLASLAWPPEAADTLRYIANTGGRMPKAATTALRRSLPQTKVFLMYGLTEAFRSTYLPPEEVDKRPDSIGKAIPNVEIQVAREDGSLCLPGESGELVHRGVLVAMGYWNDPKKTAERFRPTPGQPPELPLTEIAVWSGDTVRMDEDGFFYFIGRQDEMIKTSGYRVSPTEVEEVLYQAGLVAEAAVVGVLHPKLGQGIVAIVKPNKDNFDPEDLLATCRAELPNFMVPLAVIVSENLPRNTNGKIDRRALAMEFELLFKEQTAP GT:EXON 1|1-538:0| BL:SWS:NREP 1 BL:SWS:REP 17->524|LCFB_BACSU|4e-54|29.6|494/513| PROS 179->190|PS00455|AMP_BINDING|PDOC00427| SEG 45->61|eacargllalglasser| SEG 78->84|gaaaagg| SEG 452->464|aglvaeaavvgvl| BL:PDB:NREP 1 BL:PDB:REP 11->524|1amuA|2e-31|28.9|453/509| RP:PDB:NREP 1 RP:PDB:REP 11->529|2d1tA|4e-67|21.5|506/538| RP:PFM:NREP 1 RP:PFM:REP 36->449|PF00501|6e-57|38.0|387/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 36->460|PF00501|4.4e-106|34.7|409/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 11->524|1md9A|4e-72|21.3|493/536|e.23.1.1| HM:SCP:REP 10->529|1pg4A_|2.3e-155|39.5|509/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 9625 OP:NHOMOORG 1035 OP:PATTERN 44-2--7FIHIHHHEB1164532HB55411493221--333217566943433----1---232---- 46A6f874445C6AaqZKK-Ke44olKKKKKMkglhfy**1ZEZ3-15295-94A87B--UPH3cFdYJcB1-11111-398F123325522-2--1---19--2I-2341------11111111222342222429BBCD111c899F4EEE11222113113215JAW411112112111285565--3D9QDDEDEJAGDEEFGJC68EEHLDEIBJDEC45222323W43666666666666666454621212212121132222121233222111212115411111111111111111111111111112211121---62222622122I288------71-82171CB5262--B31111-11924KAAE-1--178ZQd535XRYQL22222222234-BAEB9MBA9KH-A99C78896D98DH6A5B9J38659BG2222222293114A74----------111111111111111----1EGXD-7KJBHHNPPQQRHKKFGGKTYYYXDVUDdUejV23GGD9BDCASBIKTM11A1122A22222222346E784eJB6558797446-4975824467997dN993222-222212-1--------1216119A15878375343444C9666666653667--11862------D7KB765766E7FFA76-579788A7A96AA777777768DBRS57666777777767667946566761-476767544565---312231665556S39222131-22212112778972657894JNILRNIHBFCEF8JIP4333333332244C788885334465544442222222----112222222112121-------------------------------------1A1 ----995-532-A9EQOQISSeShgdkIJJLEJQXNPLHKJLLHGGKDIcSVSWHGNHECBCE2323342321422111112223244-GHBOEH9332355EHIG2997O8F797A8144584OB2A4W*F-CCM7743A549655631A21J9998EBAIBYBM7MBXQEFFF2224f887B5ROSuSaQ65OEGA9 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 538 STR:RPRED 100.0 SQ:SECSTR ccEEcHHHTHHHHHHHHHHHHHHHHTcEEETccEEEHHHHHHHHHHHHHHHHHTccTTcEEEEEEccccTTTHHHHHHHHHHTcEEEEEcTTccHHHHHHHHHHHcccEEEEcTTTHHHHHHHHHHcTTccEEEETTcccccTTcccHHHHHHHTccTTccGGGcccccccTTTcEEEEEcccccccccccEEEEHHHHHHHHHHHTccccccTTcEEEEcccTTcHHHHHHHHHHHHHTcEEEEcccccHHHHHHHHHHTTccEEEEcGGGHHHHHHccGGGcccTTccEEEEEcccccHHHHHHHHHHTTccccEEEEEcGGGccEEEEccTTccccTTcccEEcTTcEEEEEcTTTccccTTccEEEEEEcTTcccEETTcHHHHHHHccTTEEETEEcTETTccEEEEEEEEEcTTccEEEEEEGGGccccTTccccHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEcTTccccHHHHHHHHHTTccGGGccTTcEEEcccccccTTccccHHHHHHHHHcHHTccEEE DISOP:02AL 531-538| PSIPRED ccccccccccHHHHHHHHHHHccccEEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccHHHHHHccccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEEccHHHHHHHHcccccccccccccEEEEccccccHHHHHHHHHHccccEEEEccccccccEEEEEcccccccccccccEEccccEEEEEcccccccccccEEEEEEcccHHHHHHcccHHHHHHHHHcccccccccccccccEEEccEEEEccccEEEEEEccccEEEEccEEEcHHHHHHHHHHcccEEEEEEEEEEccccccEEEEEEEcccccccHHHHHHHHHHHccccccccEEEEEccccccccccccHHHHHHHHHHHHHHcccc //