Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58420.1
DDBJ : hypothetical protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 39/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
c.87.1
:419 amino acids
:SECSTR
:PSIPRED
:RPS:PDB 4->338 3c48A PDBj 1e-09 15.6 %
:RPS:SCOP 3->373 1f0kA c.87.1.2 * 3e-04 18.9 %
:HMM:SCOP 4->411 2iw1A1 c.87.1.8 * 2.9e-18 21.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58420.1
GT:GENE ABA58420.1
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00281CH01
GT:ORG noce0
GB:ACCESSION GIB00281CH01
GB:LOCATION complement(2244251..2245510)
GB:FROM 2244251
GB:TO 2245510
GB:DIRECTION -
GB:PRODUCT hypothetical protein
GB:PROTEIN_ID ABA58420.1
GB:DB_XREF GI:76883739
LENGTH 419
SQ:AASEQ MVKRVLMIAYHFPPASGSSGMQRTLSFSRDLPEHDWQPIILSIYPRAYERRCDDQLADIGSETIVYRAFGLDTARHLALGGRYSRFLALPDRWVSWWLGAVPAGLRLIRRYRPQVLWSTYPIATAHLIGLTLHRLSGIPWIADFRDSMTEDNYPSNPRVRRAYRAVEAATVHRCTRAIFTAPGAVRMYAERYPERSDKTWVLIENGYEDSIFDTVSLPSLRDSPRPFRLVHSGVVYPNERDPRAFFEALASLKRSGQITAQSLQVVFRASGSEDYFRQLLREWGIDDIVHFEPHIPYRGALAEMLTADGLLILQASNCNHQIPAKLYEYLRARRPILGLTDSEGDTARVLRQAGIETVAPLDSAAAITATLQDFLKQLQDGTAPVASEAEIARSSRRSRVASLAECLEETIATDLNFER
GT:EXON 1|1-419:0|
SEG 158->171|rvrrayraveaatv|
SEG 386->405|aseaeiarssrrsrvaslae|
RP:PDB:NREP 1
RP:PDB:REP 4->338|3c48A|1e-09|15.6|307/399|
RP:SCP:NREP 1
RP:SCP:REP 3->373|1f0kA|3e-04|18.9|307/351|c.87.1.2|
HM:SCP:REP 4->411|2iw1A1|2.9e-18|21.0|357/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase|
OP:NHOMO 44
OP:NHOMOORG 39
OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------11---1-1111---1-------------------------2----13--------1-----------------------------------------2--11111--------------------------------1-----------------------------------------------------------------------------------------------1----2--1-11----111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1---1--------------11--11----------------1---1-----------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 372
STR:RPRED 88.8
SQ:SECSTR ###EEEEEcTTccTTcccccHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEEEccccEEEEEEEEEETTEEEEEEcccccccccGGGGGHGGHHHHHHHHHHHHHHHTccccEEEEEHHHHHHHHHHHHHHHTccEEEEccccHcHHHcccccHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHcccGGGEEEEccccccTTTcccccHHHTTcccccEEEEEEccccG#GGcHHHHHHHHHHHHHcGGGHcTTccEEEEEEccccHHHHHHHHTTcTTTEEEEccccHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHTTccEEEEEccTTHHHHccTTTcE#EEEcTTcHHHHHHHHHHHHTT##########################################
PSIPRED cccEEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccEEEEEccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcHHHHHHHHHHcccccccEEEEEEccccHHHccccccHHHccccccEEEEEEEEEccccccHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHccEEEEEccccccccccHHHHHHHHccccEEEEEccccHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
//
[GTOP]
