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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58422.1
DDBJ      :             DegT/DnrJ/EryC1/StrS aminotransferase
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  368/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:402 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->192 2c81A PDBj 3e-12 28.3 %
:RPS:PDB   52->399 3bn1A PDBj 1e-17 22.3 %
:RPS:SCOP  53->193 1o61A  c.67.1.4 * 7e-27 27.0 %
:HMM:SCOP  21->402 1b9hA_ c.67.1.4 * 1.9e-33 25.6 %
:RPS:PFM   53->179 PF01041 * DegT_DnrJ_EryC1 5e-18 34.6 %
:HMM:PFM   53->196 PF01041 * DegT_DnrJ_EryC1 1.7e-30 31.2 144/363  
:BLT:SWISS 53->216 ARNB_EDWI9 6e-15 32.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58422.1 GT:GENE ABA58422.1 GT:PRODUCT DegT/DnrJ/EryC1/StrS aminotransferase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2246477..2247685) GB:FROM 2246477 GB:TO 2247685 GB:DIRECTION - GB:PRODUCT DegT/DnrJ/EryC1/StrS aminotransferase GB:PROTEIN_ID ABA58422.1 GB:DB_XREF GI:76883741 InterPro:IPR000653 LENGTH 402 SQ:AASEQ MSKQAERVKFHPINEEAALFPKPMVPVLPVLSANSLFGGGTQSYRSRFFEGDALPVRRGRIGIVMALQAMGTGPGSAVLVPAYHCRSMIEPILWLGATVRFYKLKPNLEIDLEDVRHKLERSTKALLLVHFFGFPQPLALVRTLCSEHGIALIEDCAHAFFGESEGSPLGSVGDFSIASMPKFFPAVDGGILCPASRITGTLHSSGLFGQVKAAYEMVGLATRYNRLQVLGAMAGLAATIRQVLRSERATVTAAGSEPNIPSVDELMQCFNPEEIGLRATHASRLVTCWSGKAKNAERRRMHYRYLSEKLSGLPRTELVFPVLPPGVIPYMFPILLKAPARDFAPLKRLRVPIWRWEEIAYSECLVSQDYRMRLLQIPCHQGLCQSELDWMIARFREVLDSH GT:EXON 1|1-402:0| BL:SWS:NREP 1 BL:SWS:REP 53->216|ARNB_EDWI9|6e-15|32.3|164/381| BL:PDB:NREP 1 BL:PDB:REP 54->192|2c81A|3e-12|28.3|138/408| RP:PDB:NREP 1 RP:PDB:REP 52->399|3bn1A|1e-17|22.3|300/367| RP:PFM:NREP 1 RP:PFM:REP 53->179|PF01041|5e-18|34.6|127/358|DegT_DnrJ_EryC1| HM:PFM:NREP 1 HM:PFM:REP 53->196|PF01041|1.7e-30|31.2|144/363|DegT_DnrJ_EryC1| RP:SCP:NREP 1 RP:SCP:REP 53->193|1o61A|7e-27|27.0|141/374|c.67.1.4| HM:SCP:REP 21->402|1b9hA_|1.9e-33|25.6|324/0|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 518 OP:NHOMOORG 398 OP:PATTERN --------1-------1211111----1------2--11----1--1314-1-111-1-11---1--1 -22-2--------------------------------11--2---21------1------31-1222--2----------21---1--11-1-1-----1---32--2-3-----------------11112113112221---1-2211222121111-1121111111121211211-121---1--11--3-------------2---1121--2----1---------1--------------------------------1---------------------------------------------------------1-1------1---------1-----1-1--1-1211132---1---1----1-3---111-1-112-1-22-1111111111-11----2-12------------12-1-121-11-1-----111111111111111121-------------------------------3-----1111------1----11--1111-2---2--212--11211--3-21---3----221111111--1-1--11211221-222214-233132111111141-11---1111-----------2---112----2--11-21111---111--21--11---1-22--------121111111111111-1111111111111111111111123211-1111111111111111--1112--111111111111----22222----11------1-------1-------------1-11111212---1----1--------------11111-1--1----------------1---1111--------1----------------------------1-1---11--3- ---------------------------------1-1------------------------------------------------------------------------2------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 96.0 SQ:SECSTR ################HHHHTccGGGEEEcccHHHHHHHHHHHHcHHHHHTEEEEEccHHHHHHHHHHHTTccTTcEEEEEccccTHHHHHHHHHTcEEEEEccTTTccccHHHHGGGccTTEEEEccccGGGccccHHHHHHHHHHTTcEEEEEcTTcTTcEETTEETTccccEEEEEcTccccccccEEEEEccHHcTTcccccccEEEEEccHccHHHHHHHHHHcTTccHHHHHHHHHHHTTcTTccccccccccccHHHHHHHHHHHHTHcTTcccccccEEEEEcTHHHHHHHHHHHHHHHHHGGGGGGEEcccccTTcccccccEEEEEcccccHHHHHHHHHccGGGGGGGccTTcHHHHHHHHHEEEEcccTTccHHHHHHHHHHHHHHcHHH DISOP:02AL 1-6, 8-10| PSIPRED cccccHHcccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccEEEEEEccccccccHHHHHHHccccccEEEEEccccccccHHHHHHHHHHcccEEEEEcccccccEEccEEEcccccEEEEEccccccccccEEEEccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHccccccccccccccccHHHHHHHccEEccccccccHHHHHHHHHHHHHHHHcc //