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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58453.1
DDBJ      :             Transposase
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  204/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
g.72.1
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   94->204 3ee7B PDBj 2e-15 6.5 %
:RPS:SCOP  299->350 1wj0A  g.72.1.1 * 1e-13 19.2 %
:RPS:PFM   1->45 PF12323 * HTH_14 5e-10 51.1 %
:RPS:PFM   70->278 PF01385 * Transposase_2 4e-34 41.8 %
:RPS:PFM   292->354 PF07282 * Transposase_35 2e-08 41.9 %
:HMM:PFM   66->275 PF01385 * Transposase_2 3.3e-36 25.7 202/227  
:HMM:PFM   290->357 PF07282 * Transposase_35 4.2e-19 37.9 66/69  
:HMM:PFM   2->44 PF12323 * HTH_14 2.5e-18 51.2 43/46  
:BLT:SWISS 2->351 YSNA_STRPR 1e-53 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58453.1 GT:GENE ABA58453.1 GT:PRODUCT Transposase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2289608..2290759 GB:FROM 2289608 GB:TO 2290759 GB:DIRECTION + GB:PRODUCT Transposase GB:PROTEIN_ID ABA58453.1 GB:DB_XREF GI:76883772 InterPro:IPR001959 InterPro:IPR010095 LENGTH 383 SQ:AASEQ MKAYQLRLYPTLRQRRQLEEAFSACRYVWNWALDRRTRAYKEKGESLNAIALSRALTALKKEKVFLKAASATALTYVLKSQDEAFQKFFNKQARYPKFKRRGRVHSCTFQLDKRRGEKVFMPGQLLRLPKLGPVRVVWSYQDIPVFPNSATVSCNACGQWFVSLQCDCIDVIHPPATDKTIGLDLGLSTLIAMSDGRKEKPRRFLKNALRRLRFAQRRLSKTAKGGSNRRKQRSRVARLHQRIASKRANFLHGLSTSIVRENQAIAIEDLNVRGVMANGKLARSVGDCGWYELRRQLTYKAKWYGRQLNVVPRFQRTTGVCPDCGTVGEKLPLRVRSWTCGHCGSAHDRDIAAARVIDLMGNTARSAGIDACGLAHKPEEAVS GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 2->351|YSNA_STRPR|1e-53|36.0|344/402| SEG 208->219|alrrlrfaqrrl| RP:PDB:NREP 1 RP:PDB:REP 94->204|3ee7B|2e-15|6.5|107/115| RP:PFM:NREP 3 RP:PFM:REP 1->45|PF12323|5e-10|51.1|45/46|HTH_14| RP:PFM:REP 70->278|PF01385|4e-34|41.8|201/207|Transposase_2| RP:PFM:REP 292->354|PF07282|2e-08|41.9|62/70|Transposase_35| HM:PFM:NREP 3 HM:PFM:REP 66->275|PF01385|3.3e-36|25.7|202/227|Transposase_2| HM:PFM:REP 290->357|PF07282|4.2e-19|37.9|66/69|Transposase_35| HM:PFM:REP 2->44|PF12323|2.5e-18|51.2|43/46|HTH_14| RP:SCP:NREP 1 RP:SCP:REP 299->350|1wj0A|1e-13|19.2|52/58|g.72.1.1| OP:NHOMO 1011 OP:NHOMOORG 228 OP:PATTERN ------1-7114--A--1------2--1423B-1---2----------215F3-1---1---11---- ----1------------11-11----11111-1---2-76-18O------------------1---D3113----41----------1--------------------2---------------------------C-12----4-24Z4RL*HW11------21X3AK26-------------28-----1A-33333-5C35431351-----23451-1-D3------4----------------1----15-----9-H2--55---2---------------------------------------------------33---------2-4--922-53M34--4--11211A----2-----1--6-----------------------------------------3-2--------------------------------111111112-----------------------------------------------B77-3B-------1-------1----1------------B1----------------------2-------------------------------------------3-2-51----------2-----2----31--------3------------2H-------------3--12221-1-32-22142113132-3111111-------D---1---1---1111121111233------------------------------1-------------64---------1J5----------------------------------------------------1-32----------2--5--1-------------------------------54-211-18-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 107 STR:RPRED 27.9 SQ:SECSTR #############################################################################################EEEEEEEccT##TTcccEEEEEEEEccccccE#EEEEEEccccccEEEEEcTTccEEEEEccccEEEEEccTTc#cEEEEEEEcTTccHHHHHHHHHHHHccccccccccc################################################################################################################################################################################### DISOP:02AL 221-229, 374-383| PSIPRED cEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccccEEEEEcccEEEEccccEEEEEEcccccccEEEEEEEEEEccccEEEEEEEEccccccccccccEEEEEEcccEEEEccccEEEccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHcHHHHHHHHcHHHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccccccccEEEEccccEEEccHHHHHHHHHHHHHHcccccccccccccccccccc //