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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58460.1
DDBJ      :             signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  436/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.110.2d.122.1
:694 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   570->677 3d36B PDBj 7e-11 32.7 %
:RPS:PDB   322->449 3e98B PDBj 9e-05 10.9 %
:RPS:PDB   472->677 3d36B PDBj 1e-22 21.0 %
:RPS:SCOP  299->449 1mc0A1  d.110.2.1 * 5e-06 10.7 %
:RPS:SCOP  472->526 1joyA  a.30.2.1 * 2e-04 16.3 %
:RPS:SCOP  534->688 1bxdA  d.122.1.3 * 4e-19 21.2 %
:HMM:SCOP  316->466 1mc0A2 d.110.2.1 * 9.8e-10 18.1 %
:HMM:SCOP  451->537 2c2aA1 a.30.2.1 * 9.8e-07 16.1 %
:HMM:SCOP  529->677 1gkzA2 d.122.1.4 * 3.2e-30 31.8 %
:RPS:PFM   408->449 PF01590 * GAF 4e-04 46.3 %
:RPS:PFM   576->677 PF02518 * HATPase_c 2e-14 43.4 %
:HMM:PFM   574->678 PF02518 * HATPase_c 1.1e-21 37.5 104/111  
:HMM:PFM   472->528 PF00512 * HisKA 3.5e-07 19.3 57/68  
:HMM:PFM   401->450 PF01590 * GAF 4e-05 32.0 50/154  
:BLT:SWISS 15->132 XKR7_RAT 9e-04 33.3 %
:BLT:SWISS 474->676 DCTB_RHILE 2e-14 29.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58460.1 GT:GENE ABA58460.1 GT:PRODUCT signal transduction histidine kinase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2300762..2302846) GB:FROM 2300762 GB:TO 2302846 GB:DIRECTION - GB:PRODUCT signal transduction histidine kinase GB:PROTEIN_ID ABA58460.1 GB:DB_XREF GI:76883779 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 LENGTH 694 SQ:AASEQ MNNLALISYGAGAVAFTALFIILAIGYRNRPVGGVLLFAVAVNAGWLAVSAYDSYVDYLSPLWVQILETFRDGVWYAFLFHALGFNFKFQGLTRRLAVLVFIFVLLQGGLLIGFSWLEWLLGAKLSYEIVLVGQILLAVIGLMLVEQLLRSVPQDKRWAIKHLCFGLAALFVYDFFLYADALLLQVVDTGVWSARGLANAMVVPFIAVSAARNPQWSPDVYVSRRMVFHTATFLGAGFYLLAMAGAGYYVRHFGGSWGIMAQAVFLFAAALLLLSLLSSGQLKAKLRVFISKHFFNYKYDYREEWLHFISMLSEDSSIPLGERVTRALAQIVESPGGVLWQPKEKYYVPTFVWNFPFPEGLMEPKQSAFLQFLQEQEWIMEEGAKGEATHPHPVPIPEWFNSFPKLWLIVPLIHRESLVGFLVLARSQARAALDWEDRDLLRTTGREAASYLAHQEAAEQLAQAQQFAAFHRFSAYVVHDLKNLIAQLSLLVRNAAYHKHNPAFIDDAVQTIHHAVQRMQRLMSQLRSTGEEERQEIFDVVALARELVKHYAAQQPRPEVEGEDKDFIGICANRERFKSILGHLIQNAQEATLPEGRVVLRISREKEIVRIDVEDSGQGMVPAFVRERLFRPFDSTKGLTGMGIGAFEVQEYIQEIGGDIEVRSVPGKGTCFVLRIPQGEVERSRMEEVKEAVS GT:EXON 1|1-694:0| BL:SWS:NREP 2 BL:SWS:REP 15->132|XKR7_RAT|9e-04|33.3|102/580| BL:SWS:REP 474->676|DCTB_RHILE|2e-14|29.1|199/622| TM:NTM 8 TM:REGION 5->26| TM:REGION 32->54| TM:REGION 97->119| TM:REGION 129->151| TM:REGION 165->187| TM:REGION 192->214| TM:REGION 226->248| TM:REGION 260->281| SEG 261->286|aqavflfaaallllsllssgqlkakl| SEG 452->471|lahqeaaeqlaqaqqfaafh| BL:PDB:NREP 1 BL:PDB:REP 570->677|3d36B|7e-11|32.7|107/221| RP:PDB:NREP 2 RP:PDB:REP 322->449|3e98B|9e-05|10.9|110/172| RP:PDB:REP 472->677|3d36B|1e-22|21.0|205/221| RP:PFM:NREP 2 RP:PFM:REP 408->449|PF01590|4e-04|46.3|41/143|GAF| RP:PFM:REP 576->677|PF02518|2e-14|43.4|99/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 574->678|PF02518|1.1e-21|37.5|104/111|HATPase_c| HM:PFM:REP 472->528|PF00512|3.5e-07|19.3|57/68|HisKA| HM:PFM:REP 401->450|PF01590|4e-05|32.0|50/154|GAF| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 299->449|1mc0A1|5e-06|10.7|149/187|d.110.2.1| RP:SCP:REP 472->526|1joyA|2e-04|16.3|49/67|a.30.2.1| RP:SCP:REP 534->688|1bxdA|4e-19|21.2|151/161|d.122.1.3| HM:SCP:REP 316->466|1mc0A2|9.8e-10|18.1|149/0|d.110.2.1|1/1|GAF domain-like| HM:SCP:REP 451->537|2c2aA1|9.8e-07|16.1|87/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 529->677|1gkzA2|3.2e-30|31.8|148/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 1108 OP:NHOMOORG 443 OP:PATTERN --------------------------------------------1----1317--------------- 48B11---111----------1-------------------------------1--------1-1--11-1---------1--1--11333--311--------3-14G3--------------1---1----11-577331--6-233111-11--------32111141---------------111--31-111111------12-11221---11111152------31-11111111111111-------1----1-1---11---------11--------------------------------------------112-2-1--------2211-----111-1--2-33-11---1311-----44-2111-----34412212415231111-111111-748455CF12-113344213233234-1112-1221-2---------2----124------------------------------11211211-111121322-1122-12211-22422123--11135322-32131--121--3--------2212842BA4-353-36987-74B78691888GAPH26---------------------1---11312313212-1-----1------11--111---2332------1212-223213333323-223233323223122322222211---1111111111111111222121221-344444443444---1---------1-32--------------------------3466772423433335344---------2111-------11222132322111--------22--33-------------------------------------2-221-111141 --------------2-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 56.6 SQ:SECSTR #############################################################################################################################################################################################################################################################################################################HHHHHHHHHHHcccccHHHHHHHHHHHHHTccccEEEEEEEccccEEcHHHHHHHGGcHHHHHHHHHTccGTTHTTccccccEEEcccHHHHHHHHHHTTcccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTHHHHHGGGcccTTcTTTTHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHTTEEEEEccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEEEEEEEEEETTEEEEEEEEccccccHHHHHHHTTcTTccccGGGccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEccTTTcccccccccHHH DISOP:02AL 458-467, 497-505, 678-694| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHEEEEEEEEEEEEcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHEEcccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccccEEEccccccccHHHHHHHHHHHHccEEEEEEEcccEEEEEEEEcccccccccccccccccc //