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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58488.1
DDBJ      :             serine hydroxymethyltransferase
Swiss-Prot:GLYA_NITOC   RecName: Full=Serine hydroxymethyltransferase;         Short=Serine methylase;         Short=SHMT;         EC=2.1.2.1;

Homologs  Archaea  61/68 : Bacteria  896/915 : Eukaryota  191/199 : Viruses  1/175   --->[See Alignment]
c.67.1
:417 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->416 1dfoB PDBj e-156 65.1 %
:RPS:PDB   4->417 1dfoA PDBj 3e-74 67.8 %
:RPS:SCOP  8->417 1bj4A  c.67.1.4 * e-141 44.3 %
:HMM:SCOP  1->417 2a7vA1 c.67.1.4 * 3.8e-175 61.3 %
:RPS:PFM   8->383 PF00464 * SHMT e-149 65.9 %
:HMM:PFM   9->386 PF00464 * SHMT 3e-179 63.1 377/399  
:BLT:SWISS 1->417 GLYA_NITOC 0.0 100.0 %
:PROS 222->238|PS00096|SHMT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58488.1 GT:GENE ABA58488.1 GT:PRODUCT serine hydroxymethyltransferase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2338734..2339987) GB:FROM 2338734 GB:TO 2339987 GB:DIRECTION - GB:PRODUCT serine hydroxymethyltransferase GB:PROTEIN_ID ABA58488.1 GB:DB_XREF GI:76883807 InterPro:IPR001085 LENGTH 417 SQ:AASEQ MYSKEMRIASYDEELETALTNEARRQEEHIELIASENYVSPRVLEAQGSVLTNKYAEGYPGKRYYGGCEYVDVAERLAIERAKILFEADYANVQPHSGSQANAAACLALLAPGDTLMGLSLAHGGHLTHGAKVNFSGQIFNAVQFGVNADTGLIDYDEVEQLAKAHRPKLIIAGFTAYSRIVDWQRFRAIADGVGAYLLADIAHLAGMIAAGIYPNPVQIADVTTSTTHKTLRGPRSGLILAKANPEIEKKLNSKVFPGIQGGPLMHVVAAKAVAFKEAMEPAFKDYQRQVIRNAQAMAEAIQSRGYKIVSGGTDSHLFLVDLVAKGLTGKAADAALGRANITVNKNTVPNDPQSPFVTSGIRIGSPAMTTRGFKEAEICELAGWVCDVLDDIENETVIADTKEKVLALCARFPVYG GT:EXON 1|1-417:0| SW:ID GLYA_NITOC SW:DE RecName: Full=Serine hydroxymethyltransferase; Short=Serine methylase; Short=SHMT; EC=2.1.2.1; SW:GN Name=glyA; OrderedLocusNames=Noc_2027; SW:KW Complete proteome; Cytoplasm; One-carbon metabolism;Pyridoxal phosphate; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->417|GLYA_NITOC|0.0|100.0|417/417| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006730|"GO:one-carbon metabolic process"|One-carbon metabolism| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 222->238|PS00096|SHMT|PDOC00090| SEG 101->111|anaaaclalla| SEG 268->275|vvaakava| BL:PDB:NREP 1 BL:PDB:REP 1->416|1dfoB|e-156|65.1|415/417| RP:PDB:NREP 1 RP:PDB:REP 4->417|1dfoA|3e-74|67.8|413/416| RP:PFM:NREP 1 RP:PFM:REP 8->383|PF00464|e-149|65.9|375/378|SHMT| HM:PFM:NREP 1 HM:PFM:REP 9->386|PF00464|3e-179|63.1|377/399|SHMT| GO:PFM:NREP 3 GO:PFM GO:0004372|"GO:glycine hydroxymethyltransferase activity"|PF00464|IPR001085| GO:PFM GO:0006544|"GO:glycine metabolic process"|PF00464|IPR001085| GO:PFM GO:0006563|"GO:L-serine metabolic process"|PF00464|IPR001085| RP:SCP:NREP 1 RP:SCP:REP 8->417|1bj4A|e-141|44.3|409/470|c.67.1.4| HM:SCP:REP 1->417|2a7vA1|3.8e-175|61.3|416/0|c.67.1.4|1/1|PLP-dependent transferases|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s3333275DB2943342223 -----------------------------------1------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 417 STR:RPRED 100.0 SQ:SECSTR cccTTccHHHHcHHHHHHHHHHHHHHHHcEEccTTcccccHHHHHHHTcGGGGccccEETTEEcccccHHHHHHHHHHHHHHHHHHTccEEEcccccHHHHHHHHHHHHccTTcEEEEEcTTTTccGGGTcTTcHHHHHcEEEEEcccccTccccHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHTTcEEEEEcTTTHHHHHHTcccccTTTccEEEEEcccTTcccccEEEEEccccHHHHHHHHHHTTTTcccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHTTcEEGGGcccccEEEEEcGGGTccHHHHHHHHHHTTEEcEEcccTTccccTTTccEEEEEcHHHHHTTccHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHccccc PSIPRED cccccccHHHHcHHHHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHcccEEEEEcHHHHHHHcccccccccccccEEEEEccccccccccEEEEEcccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEEEcccccccHHHHHHHHHHccEEEcccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccc //