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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58502.1
DDBJ      :             OmpA/MotB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  618/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
d.79.7
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   141->272 2k1sA PDBj 8e-20 38.6 %
:RPS:PDB   169->281 3cypB PDBj 2e-31 27.4 %
:RPS:SCOP  168->271 1oapA  d.79.7.1 * 3e-30 33.7 %
:HMM:SCOP  139->272 2aizP1 d.79.7.1 * 4.9e-36 43.3 %
:RPS:PFM   171->264 PF00691 * OmpA 6e-17 46.8 %
:HMM:PFM   171->266 PF00691 * OmpA 4e-27 47.4 95/97  
:BLT:SWISS 169->269 PORF_PSEFL 7e-22 48.5 %
:PROS 204->248|PS01068|OMPA_1
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58502.1 GT:GENE ABA58502.1 GT:PRODUCT OmpA/MotB GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2352260..2353120) GB:FROM 2352260 GB:TO 2353120 GB:DIRECTION - GB:PRODUCT OmpA/MotB GB:PROTEIN_ID ABA58502.1 GB:DB_XREF GI:76883821 InterPro:IPR006664 InterPro:IPR006665 InterPro:IPR006690 LENGTH 286 SQ:AASEQ MKVSFFRNGVNKGILVLGFFSVFLVAACAPPTKPVDLERADAAIEQAQADSNVAQYAPVRLDEAKEALQRAQVAWEEDESVEEVEHLAYLAQQRAAIAEVAAADKAAQAEIKNLGQERQQMLMDVHELEARQAKEQAKMAEIRADKLEKRLAELNAEKTERGYVLTLGDILFEVDSAELTSGGMQNLFRLVTFLKEYPDREVVVEGHTDSTGSAVYNMELSQRRADSVYLFLVNNGIAPDRIVAHGYGQGYPVAPNNTTAGRQKNRRVEIVILGAGKQAEEYQRPG GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 169->269|PORF_PSEFL|7e-22|48.5|101/326| PROS 204->248|PS01068|OMPA_1|PDOC00819| COIL:NAA 61 COIL:NSEG 1 COIL:REGION 101->161| SEG 76->85|eedesveeve| SEG 91->109|aqqraaiaevaaadkaaqa| BL:PDB:NREP 1 BL:PDB:REP 141->272|2k1sA|8e-20|38.6|132/149| RP:PDB:NREP 1 RP:PDB:REP 169->281|3cypB|2e-31|27.4|113/129| RP:PFM:NREP 1 RP:PFM:REP 171->264|PF00691|6e-17|46.8|94/97|OmpA| HM:PFM:NREP 1 HM:PFM:REP 171->266|PF00691|4e-27|47.4|95/97|OmpA| GO:PFM:NREP 1 GO:PFM GO:0009279|"GO:cell outer membrane"|PF00691|IPR006665| RP:SCP:NREP 1 RP:SCP:REP 168->271|1oapA|3e-30|33.7|104/108|d.79.7.1| HM:SCP:REP 139->272|2aizP1|4.9e-36|43.3|134/0|d.79.7.1|1/1|OmpA-like| OP:NHOMO 2163 OP:NHOMOORG 622 OP:PATTERN -------------------------------------------------------------------- 3361-------------11-1---1-111111--------1312---11--------------1---111-------------1-222112--4221--289876BOA1B11111111111111132556333623---------1-------12----1------2---2-1-----1-----------4111112121222222112112212221111121111111121------------------------------------------------------------------------------------------13122111111121212111---111---11112112111112--11-6432-31131-11-213643423243422222222224-1121121337315334454554442234245366884571111111122223434----1-----1111--111111111----13342234424C668796444466865555377456564244224242242344122663353211-----214346577234642564432A7B5976665585FM4242211111111-2-------223--334613477343488686568889867968581-44726-1----35213423334344443-33333333343433333337763243135333333333333336332333321677777657876-11311111333324935----31-222112235666655545759999A99ACAAAC86662222222221889744444BB87754344443443333--12777777111-1--132------------------------------------311 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------1-----1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 157 STR:RPRED 54.9 SQ:SECSTR ################################################################################################################################HHHHHHHHHHHHHHHHHHHHHHTTTTccEEEEETTEEEEcEEcccTTcccccHHHHHHHHHHHHHHTTccTTcEEEEEEcccccccccHHHHHHHHHHHHHHHHHHTTccGGGEEEEEcTTccccccTTcHHHHHHHcEEEEEEEccHHHHHHHHHH# DISOP:02AL 1-3, 46-59, 74-85, 104-155, 278-286| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccEEEEEccEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEEcccccccccccHHHHHcccEEEEEEEcccccHHHHHccc //