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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58511.1
DDBJ      :             Transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:111 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   7->42 1biaA PDBj 9e-04 16.7 %
:RPS:SCOP  5->58 1pdnC  a.4.1.5 * 7e-04 16.7 %
:HMM:SCOP  5->98 1pdnC_ a.4.1.5 * 3.2e-09 23.4 %
:RPS:PFM   5->103 PF01710 * Transposase_14 2e-14 48.5 %
:HMM:PFM   2->105 PF01710 * Transposase_14 5.4e-48 42.7 103/120  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58511.1 GT:GENE ABA58511.1 GT:PRODUCT Transposase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2360489..2360824 GB:FROM 2360489 GB:TO 2360824 GB:DIRECTION + GB:PRODUCT Transposase GB:PROTEIN_ID ABA58511.1 GB:DB_XREF GI:76883830 InterPro:IPR002622 LENGTH 111 SQ:AASEQ MMRCSIDLRKRVIDFVRGGGSKAEAARRFQVGRASIYRWLSQDDALCYERPGPRRSHKLDWEALRVHVEDKAALTYKERARHFGVSYYCIWHAMHKMGLTRKKNDGVHAAL GT:EXON 1|1-111:0| RP:PDB:NREP 1 RP:PDB:REP 7->42|1biaA|9e-04|16.7|36/292| RP:PFM:NREP 1 RP:PFM:REP 5->103|PF01710|2e-14|48.5|99/114|Transposase_14| HM:PFM:NREP 1 HM:PFM:REP 2->105|PF01710|5.4e-48|42.7|103/120|Transposase_14| RP:SCP:NREP 1 RP:SCP:REP 5->58|1pdnC|7e-04|16.7|54/123|a.4.1.5| HM:SCP:REP 5->98|1pdnC_|3.2e-09|23.4|94/0|a.4.1.5|1/1|Homeodomain-like| OP:NHOMO 97 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------15K-----------Q-----3--------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------------------------------------------------------------------------P------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 36 STR:RPRED 32.4 SQ:SECSTR ######HHHHHHHHHHTTcccHHHHHHHHTccHHHHHHHHHH##################################################################### DISOP:02AL 44-58, 105-111| PSIPRED cccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHcccccccccccccc //