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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58515.1
DDBJ      :             Protein of unknown function UPF0118
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  127/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:380 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   26->328 PF01594 * UPF0118 2e-17 30.7 %
:HMM:PFM   27->365 PF01594 * UPF0118 8.5e-38 25.5 318/327  
:BLT:SWISS 42->369 YUEF_BACSU 2e-17 24.4 %
:PROS 167->178|PS00962|RIBOSOMAL_S2_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58515.1 GT:GENE ABA58515.1 GT:PRODUCT Protein of unknown function UPF0118 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2364996..2366138) GB:FROM 2364996 GB:TO 2366138 GB:DIRECTION - GB:PRODUCT Protein of unknown function UPF0118 GB:PROTEIN_ID ABA58515.1 GB:DB_XREF GI:76883834 InterPro:IPR001865 InterPro:IPR002549 LENGTH 380 SQ:AASEQ MAVDKPLKLLPWYQRHLWQIVPVRDVLWIFLGAFLLWFGYQLRAIFIPLLIAFAFAYLFDPLIRWGERYCKMPRPVTISLILALVIIGGMSLLAWLGPEFLKQFAELLRGLIDYLQTLATEYDIHLLKSLRAKLEKWVQHLEENPVGFIVENTEILLIGTTQAVTVVRHILGTAVYIGTMALLIPFYFFMIAWHFGAIIRKIKDLMPAREKDQTLAIIKEMDEAVAAFFRGRLVIVLVTAGLFSLGWSPLFADVPYWLVLGISAGILNFIPYLAALAWLAAILSKGLAIGFSGDFDLWLVIIWPSFVYGVVQFIDGWLLTPWIQGRSLNLGAITVIIVVLIGGTMGGLYGLLLCIPMAACAKILFTGLILPRFYQWAEEH GT:EXON 1|1-380:0| BL:SWS:NREP 1 BL:SWS:REP 42->369|YUEF_BACSU|2e-17|24.4|312/369| PROS 167->178|PS00962|RIBOSOMAL_S2_1|PDOC00744| TM:NTM 9 TM:REGION 16->38| TM:REGION 43->65| TM:REGION 71->93| TM:REGION 177->199| TM:REGION 226->248| TM:REGION 263->285| TM:REGION 297->319| TM:REGION 326->348| TM:REGION 353->375| SEG 273->283|laalawlaail| SEG 330->353|lgaitviivvliggtmgglyglll| RP:PFM:NREP 1 RP:PFM:REP 26->328|PF01594|2e-17|30.7|283/328|UPF0118| HM:PFM:NREP 1 HM:PFM:REP 27->365|PF01594|8.5e-38|25.5|318/327|UPF0118| OP:NHOMO 139 OP:NHOMOORG 127 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------11----------1---------------------------1-111-----1--------------------------------------1---------21111121121112211-22221111-1-2--11111--1-11111111111111-----1-1-11-----11--11----11---111-----11------------------------111---111--------------------------------------1---1---1------------11111--------------------------------1---1---111111-------1-----------------------1--------------------------111-------------------------------------11--111-----------------1-----------1-11--------------------1-1------1--------------------------------------------------------------12--2---------------------------------------------------------------------------------------------------------1--------1-11----1111111111-------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3| PSIPRED cccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //