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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58525.1
DDBJ      :             Lipolytic enzyme, G-D-S-L
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  21/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.10
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   316->346 1bwqA PDBj 3e-04 16.1 %
:RPS:SCOP  319->349 1escA  c.23.10.1 * 5e-04 16.1 %
:RPS:PFM   197->344 PF00657 * Lipase_GDSL 4e-06 38.6 %
:HMM:PFM   33->346 PF00657 * Lipase_GDSL 5.1e-19 30.0 217/235  
:HMM:PFM   351->369 PF07589 * VPEP 7.8e-10 73.7 19/25  
:BLT:SWISS 34->347 GDL30_ARATH 1e-09 34.2 %
:PROS 31->42|PS01098|LIPASE_GDSL_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58525.1 GT:GENE ABA58525.1 GT:PRODUCT Lipolytic enzyme, G-D-S-L GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2374659..2375861 GB:FROM 2374659 GB:TO 2375861 GB:DIRECTION + GB:PRODUCT Lipolytic enzyme, G-D-S-L GB:PROTEIN_ID ABA58525.1 GB:DB_XREF GI:76883844 InterPro:IPR001087 InterPro:IPR008265 LENGTH 400 SQ:AASEQ MRNFSLHISHICLILLILLSPSSVIASPIPMIIFGDSLSDTGNMFSLSGGALPPSPPYAEKFSNGLNWVDQIAADYGLGAPNNVYSSGVLAGEIDNFAIGGAYTGPWPFDFSSLGTLPSRNSNDGLVGAPILPGLQGEVALPGAALSQVELFSLVSGGTAPSNARYTIWAGANDLIFAPEFSPAGTLASADVAASGVTNIRMTIEDLAAMGAEKFLVLNLPDLGSTPLGILSGREAELTAGTELFNIGLERMITEVSATLGIEITLLDIHTIFDNLLAAALADPAATGFPDVAALTSLGVPPGFAFCIDQRALTNFCAPGFEPNDRIFWDLLHPTARTYSLIADAVVRTEIPEPTTLVLIGLGLAGLGFTRQGRFKLGLWGLGGIRAQSHSETNAKPILL GT:EXON 1|1-400:0| BL:SWS:NREP 1 BL:SWS:REP 34->347|GDL30_ARATH|1e-09|34.2|269/344| PROS 31->42|PS01098|LIPASE_GDSL_SER|PDOC00842| SEG 5->33|slhishiclillillspssviaspipmii| SEG 46->57|slsggalppspp| SEG 276->286|llaaaladpaa| SEG 357->368|lvliglglaglg| RP:PDB:NREP 1 RP:PDB:REP 316->346|1bwqA|3e-04|16.1|31/212| RP:PFM:NREP 1 RP:PFM:REP 197->344|PF00657|4e-06|38.6|101/201|Lipase_GDSL| HM:PFM:NREP 2 HM:PFM:REP 33->346|PF00657|5.1e-19|30.0|217/235|Lipase_GDSL| HM:PFM:REP 351->369|PF07589|7.8e-10|73.7|19/25|VPEP| GO:PFM:NREP 2 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF00657|IPR001087| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00657|IPR001087| RP:SCP:NREP 1 RP:SCP:REP 319->349|1escA|5e-04|16.1|31/302|c.23.10.1| OP:NHOMO 24 OP:NHOMOORG 21 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------1-1111---------------1141------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1---------------------------------------------------------------------------------------1-----1--------------11------------------------------------------------------------------------1----------------------1-----------------------------------------------------------------------------------------------------------------------------------------11-1--------------------------------------1----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 46 STR:RPRED 11.5 SQ:SECSTR ##############################################################################################################################################################################################################################################################################################################TcEEEcHHHHHHHcccTTccccTTTcTTcccccHHHHHHHHHHHHH#################################################### DISOP:02AL 1-2, 387-392| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccEEccccHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEHHHHccccHHHHccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHccHHHccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccc //