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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58542.1
DDBJ      :             Sodium-transporting two-sector ATPase
Swiss-Prot:VATB_NITOC   RecName: Full=V-type ATP synthase beta chain;AltName: Full=V-ATPase subunit B;

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
a.24.11a.69.1c.37.1
:479 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->455 3a5cD PDBj e-136 52.4 %
:RPS:PDB   5->455 3a5cD PDBj e-124 52.4 %
:RPS:SCOP  79->352 1bmfD3  c.37.1.11 * 5e-70 30.5 %
:RPS:SCOP  329->427 1g4uS1  a.24.11.1 * 9e-12 14.3 %
:HMM:SCOP  78->357 1e79A3 c.37.1.11 * 6.7e-91 39.8 %
:HMM:SCOP  360->416 1skyE1 a.69.1.1 * 1.5e-05 23.2 %
:RPS:PFM   131->344 PF00006 * ATP-synt_ab 3e-29 35.4 %
:HMM:PFM   131->350 PF00006 * ATP-synt_ab 1.2e-62 30.0 213/215  
:HMM:PFM   368->457 PF00306 * ATP-synt_ab_C 7.2e-15 30.3 89/113  
:HMM:PFM   24->66 PF02874 * ATP-synt_ab_N 4.9e-05 20.9 43/69  
:BLT:SWISS 1->479 VATB_NITOC 0.0 100.0 %
:PROS 341->350|PS00152|ATPASE_ALPHA_BETA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58542.1 GT:GENE ABA58542.1 GT:PRODUCT Sodium-transporting two-sector ATPase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2391297..2392736) GB:FROM 2391297 GB:TO 2392736 GB:DIRECTION - GB:PRODUCT Sodium-transporting two-sector ATPase GB:PROTEIN_ID ABA58542.1 GB:DB_XREF GI:76883861 InterPro:IPR000194 InterPro:IPR000793 LENGTH 479 SQ:AASEQ MKEKEYRTASAARGGLLFMRDIPGGAFGERVIVKDHRGRRRNGQVIFTSGEVVLVQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRIFDGVGAPRDDRPPMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLLGEETRFVMVFAAMGVTYSDARFFQEEFENSGVLGKVVMYLNLADDPPIKRLLLPRTALACAEYLAFEQDLHVLVVMTDMTHYAEALREVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKNRRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHHQGIYPPVNIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAKALEVRNLASIIGAEELSPSDRQFLDFAGQFEQRFVKQGEEEDRSIIETLDLAWDLLSLLPQFALTRVTEADLAKYHKWEGDSEREAPKMDSPHEEISEKS GT:EXON 1|1-479:0| SW:ID VATB_NITOC SW:DE RecName: Full=V-type ATP synthase beta chain;AltName: Full=V-ATPase subunit B; SW:GN Name=atpB; OrderedLocusNames=Noc_2082; SW:KW ATP synthesis; Complete proteome; Hydrogen ion transport;Ion transport; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->479|VATB_NITOC|0.0|100.0|479/479| GO:SWS:NREP 4 GO:SWS GO:0006754|"GO:ATP biosynthetic process"|ATP synthesis| GO:SWS GO:0015992|"GO:proton transport"|Hydrogen ion transport| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 341->350|PS00152|ATPASE_ALPHA_BETA|PDOC00137| SEG 428->438|ldlawdllsll| BL:PDB:NREP 1 BL:PDB:REP 5->455|3a5cD|e-136|52.4|450/450| RP:PDB:NREP 1 RP:PDB:REP 5->455|3a5cD|e-124|52.4|450/450| RP:PFM:NREP 1 RP:PFM:REP 131->344|PF00006|3e-29|35.4|206/212|ATP-synt_ab| HM:PFM:NREP 3 HM:PFM:REP 131->350|PF00006|1.2e-62|30.0|213/215|ATP-synt_ab| HM:PFM:REP 368->457|PF00306|7.2e-15|30.3|89/113|ATP-synt_ab_C| HM:PFM:REP 24->66|PF02874|4.9e-05|20.9|43/69|ATP-synt_ab_N| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF00006|IPR000194| RP:SCP:NREP 2 RP:SCP:REP 79->352|1bmfD3|5e-70|30.5|269/276|c.37.1.11| RP:SCP:REP 329->427|1g4uS1|9e-12|14.3|91/130|a.24.11.1| HM:SCP:REP 78->357|1e79A3|6.7e-91|39.8|279/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 360->416|1skyE1|1.5e-05|23.2|56/114|a.69.1.1|1/1|C-terminal domain of alpha and beta subunits of F1 ATP synthase|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i6-5755433745785543354364A48866B47455A35B57546444i334239ADD4A54443334 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 456 STR:RPRED 95.2 SQ:SECSTR ccTccEEEEEEEETTEEEEEEccccccTTcEEEEcccccccEEEEEEEEETTEEEEEEccccTTccTTcEEEEccccccEEEcGGGTTEEEETTcccccccccccccEEEcccccccccccccccccccccccHHHHTTccccTTccccEEEETTccHHHHHHHHHHHcccccccccEEEEEEEEEEcHHHHHHHHHHHHHHcGGGGEEEEEEETTccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEETHHHHHHHHHHHHHHTTccccGGGccTTHHHHHHHHHTccEEcTTcccEEEEEEEEEEGGGcTTcHHHHHHGGGccccEEccHHHHHTTccccccccccccTTGGGGccTTTccTTHHHHHHHHHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHHHHHHHHHTTcccTcccccHHHHHHHHHHHHTTccGGGcTTccHHHHHHHcT####################### DISOP:02AL 264-272, 469-479| PSIPRED ccEEEEEEEEEEEccEEEEEcccccccccEEEEEcccccEEEEEEEEEEccEEEEEEEcccccccccccEEEEcccEEEEEcccccEEEEEEEcccEEcccccccccEEEEEEEEcccEEEEcccccHHHccHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHccccccEEEEEEEEcccHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccEEEEEEEEEcccccccHHHHHHHHHcccEEEEEHHHHHccccccccccccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHcc //