[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58572.1
DDBJ      :             Protein of unknown function DUF455
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  140/915 : Eukaryota  52/199 : Viruses  0/175   --->[See Alignment]
a.25.1
:280 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   57->240 3chhB PDBj 1e-18 13.3 %
:RPS:SCOP  64->236 2itbA1  a.25.1.7 * 2e-16 15.2 %
:HMM:SCOP  75->225 1nfvA_ a.25.1.1 * 1.1e-11 18.9 %
:RPS:PFM   21->266 PF04305 * DUF455 7e-77 55.7 %
:HMM:PFM   21->267 PF04305 * DUF455 3.3e-101 55.1 247/253  
:BLT:SWISS 21->267 Y077_HAEIN 4e-58 49.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58572.1 GT:GENE ABA58572.1 GT:PRODUCT Protein of unknown function DUF455 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2430151..2430993) GB:FROM 2430151 GB:TO 2430993 GB:DIRECTION - GB:PRODUCT Protein of unknown function DUF455 GB:PROTEIN_ID ABA58572.1 GB:DB_XREF GI:76883891 InterPro:IPR007402 LENGTH 280 SQ:AASEQ MDIMPLVWGKATLGEAALHCLKVCDPEEKTKVTCDVAQLWKAGCLQIGFPPKSCLPDIPGRPVWPSLVAPRELPRRKLTTVLGRAALIHAIAHIEFNAINLAWDAVCRFHDLPGEFYDDWVQVALEEAYHFCLLQDHLHSMNHEYGDFPAHDGLWEMAQKTAHDPLVRMALVPRVLEARGLDVTPGMIERLQQAGDLRAVLILEIILRDEVGHVGIGSHWFRYLCESRELNAETTFRDLVNGYFKGKTRGPLHREARLRAGFSEAELRMLDKELNDSRLC GT:EXON 1|1-280:0| BL:SWS:NREP 1 BL:SWS:REP 21->267|Y077_HAEIN|4e-58|49.4|247/100| RP:PDB:NREP 1 RP:PDB:REP 57->240|3chhB|1e-18|13.3|180/299| RP:PFM:NREP 1 RP:PFM:REP 21->266|PF04305|7e-77|55.7|246/251|DUF455| HM:PFM:NREP 1 HM:PFM:REP 21->267|PF04305|3.3e-101|55.1|247/253|DUF455| RP:SCP:NREP 1 RP:SCP:REP 64->236|2itbA1|2e-16|15.2|165/199|a.25.1.7| HM:SCP:REP 75->225|1nfvA_|1.1e-11|18.9|143/0|a.25.1.1|1/1|Ferritin-like| OP:NHOMO 222 OP:NHOMOORG 192 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-111-----------1-111111111112----111-----111-------------11--------------------------------111-111111111111111111111111111111111111111111111111-1111211111111111----111----------------------------1--11111111111-1---------11111---------------------------------1--1------------------------------------------------------------------------------------------------------1------------11--111--------------------------------------1--------------1111111111------1-------------------------------------------------------- ------1-------1----111111-1111111----------111-------------------------------------------12--1111111111------2-----1------------------------------------------1--------------1--22292222121-3-23--3222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 72.9 SQ:SECSTR ########################################################TTTTcHHHHTccHHH####HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTT################ DISOP:02AL 54-56, 70-83| PSIPRED cccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHHHHHcccc //