[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58627.1
DDBJ      :             NAD-dependent epimerase/dehydratase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  601/915 : Eukaryota  131/199 : Viruses  1/175   --->[See Alignment]
c.2.1
:349 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->324 1r6dA PDBj 6e-22 31.9 %
:RPS:PDB   2->324 1db3A PDBj 3e-31 19.0 %
:RPS:SCOP  3->321 1sb8A  c.2.1.2 * 2e-44 24.1 %
:HMM:SCOP  2->326 1eq2A_ c.2.1.2 * 1.1e-71 35.7 %
:RPS:PFM   3->224 PF01370 * Epimerase 4e-29 40.4 %
:HMM:PFM   3->229 PF01370 * Epimerase 2.7e-42 35.4 223/238  
:BLT:SWISS 3->325 GALE_VIBCH 2e-30 31.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58627.1 GT:GENE ABA58627.1 GT:PRODUCT NAD-dependent epimerase/dehydratase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2500374..2501423) GB:FROM 2500374 GB:TO 2501423 GB:DIRECTION - GB:PRODUCT NAD-dependent epimerase/dehydratase GB:PROTEIN_ID ABA58627.1 GB:DB_XREF GI:76883946 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR002225 InterPro:IPR003869 InterPro:IPR005913 InterPro:IPR008030 LENGTH 349 SQ:AASEQ MKVLVTGATGFIGRHLVAALLSRKETIRILARNVEQAEAIWSPGLLEVVRGDFANALTLGDLCEGVDIVFHLASGSFAENDKTGEAEWLHQKVAVEGTKELLRRAARAGVKRFIFVSSVKAMGEGGSSHLDEASPELPQSAYGRGKLAAERAVLEAGRTYGMHVCNLRLPMVYGSDGKGNLPRMMAAIDRGWFPPLPEVKNRRSMVHVNDVVQALLLTAENPKASHQTYIVTDGCTYSSRQIYILLCQALGRSIPGWRFPAGLLQMAAKAGDLAGWVLKREVPLNSQVLYKLMGSAWYSCAKIQRELGYRPRYSLETALPEILKALCLVTSSQRSLALSPDRREEGKRS GT:EXON 1|1-349:0| BL:SWS:NREP 1 BL:SWS:REP 3->325|GALE_VIBCH|2e-30|31.7|303/328| BL:PDB:NREP 1 BL:PDB:REP 1->324|1r6dA|6e-22|31.9|295/322| RP:PDB:NREP 1 RP:PDB:REP 2->324|1db3A|3e-31|19.0|310/335| RP:PFM:NREP 1 RP:PFM:REP 3->224|PF01370|4e-29|40.4|218/232|Epimerase| HM:PFM:NREP 1 HM:PFM:REP 3->229|PF01370|2.7e-42|35.4|223/238|Epimerase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 3->321|1sb8A|2e-44|24.1|295/341|c.2.1.2| HM:SCP:REP 2->326|1eq2A_|1.1e-71|35.7|291/307|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1975 OP:NHOMOORG 789 OP:PATTERN --2-1--1111111-12411-121444223421111--12121-121336454132322221-11-11 544-8123222---23233-3711733333337686413621462211-33241112111-1--622828------------3112--4511-311---112-3-54134---------------584688585562555533271425323311--3---1231-6865--1---1-11-111-2----2121111111-1-111-2-24441-112231-11-11121112-22222212222222-----5-1-22-1---2211222-2--1323----111322------------------------5--------121-2122231231112-11-111111--4--21--3-321232--11121-244222-----328532313213122222221211-44454843261-522255776355-3-2121344441--2222222212315731--1---------------------------32212-32232333322222222222222123241211-----1--1--22-2132231122--------43521132251-5343254115652325144245592512---11-112--------------1-131-2111--221111-11111122--211---4112------13112--1221112121-2312323322212211222-1-1-1--1111111111111111312211-1--133333333334--1-22222122221611---------------1--1--1--241323233222545421321222212222211211111--11-1121211111--1---3-333233--------1---------------------------1-2-------121 ----222-211-331---2-11-1-12-------1--111111------1-22-11--------1-1-1------------111-111-131-11111112--112-25-A7745884212363E9184884-537112-62254231215125276532322332----123442222K44423CCEF1F742----2 -----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 326 STR:RPRED 93.4 SQ:SECSTR EEEEEETTTcHHHHHHHHHHHHTTcEEEEEccccEEEcccccccHHHHHHHHHHHcccEEEEcccccTTTTccEEEEcccccTTccHHHHHHHHTHHHHHHHHHHHHTTcTTEEEEEEGGGGTTcccccccTTcccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEcTTccHHHHHHHHHHHTTccccEccTTcEEccEEHHHHHHHHHHTTcccccccccEEEcccccEEHHHHHHHHHHTTTEEEEcGGGcEEEEEEEcccccTTccTTcEEEEEcGGGccccccccccccHHHHHHHcccccccHHHHHHHHHHTc####################### DISOP:02AL 333-342, 345-349| PSIPRED cEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHccccEEEEEEccccHHHHHHHHHHccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHcccccEEccccEEEEEEEHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHHHcHHHHHHcccc //