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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58631.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:711 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   335->371 2jjmA PDBj 2e-04 45.9 %
:RPS:PDB   187->374 3c4qB PDBj 4e-14 22.0 %
:RPS:SCOP  262->410 2f9fA1  c.87.1.8 * 3e-16 21.0 %
:RPS:SCOP  565->695 2bfwA1  c.87.1.8 * 9e-04 9.8 %
:HMM:SCOP  10->427 2bisA1 c.87.1.8 * 5.4e-23 22.8 %
:RPS:PFM   17->64 PF04616 * Glyco_hydro_43 3e-04 34.8 %
:RPS:PFM   238->287 PF10274 * ParcG 8e-04 36.0 %
:RPS:PFM   258->374 PF00534 * Glycos_transf_1 4e-06 31.5 %
:RPS:PFM   490->624 PF03249 * TSA 7e-04 27.6 %
:HMM:PFM   255->390 PF00534 * Glycos_transf_1 1.1e-10 30.1 133/172  
:HMM:PFM   415->495 PF04156 * IncA 0.0001 20.8 48/191  
:BLT:SWISS 258->380 Y1607_METJA 4e-05 27.5 %
:BLT:SWISS 412->555 SPDLY_DANRE 5e-04 24.4 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58631.1 GT:GENE ABA58631.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2507155..2509290 GB:FROM 2507155 GB:TO 2509290 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA58631.1 GB:DB_XREF GI:76883950 LENGTH 711 SQ:AASEQ MTDSYPKPSLLHVLHSWGGGIARWTEDFVQHYPERRHLILYSISNRNAFGQGLELVDSAYPEMPLATWELIPPIPATALTHPQYRTLLSDLLASLAVEAVVVSSLIGHSLDALTTGQPTLRVLHDLYPYCPAMFGYFGTSCERCNQESLANCLELNPHNECWHNSTAEDWLAMRQAYAAAILQPQVHLVAPSHTAQDRLYQLYPEIAGKRYHLITHGIDLKKLRPPTSRAAGDSPTCYGKTSLPQAEERGGKAHKLRIVVPGRLELHKGLPLLRDALPRLTHQAEFLLLGCGLFGQSFADIKGITLVPDYNLDELRPLIQNFSPDCALLLSTLPETFSYTLSEMWALGIPPLATRLGAFGERIQHGINGFLYLPTVQDLITLVTALAKDRVPLSRVAYHLDTHPIRQARDMVQDYQALLPSHHSKPLKQGTWLTQGIENAQIRNHSNHTQLKQEARRQAAELAKSRQRLNEMSQRLSYHQAHAKTLERELAALRHSNSWRVTAPLRALHTRLRPNPPLAANQNSPPIANGREASIPHQPTQNTSSVSENRNKLQERPYTLEERSRADLPQRLTSRIDLRDRLGIPDAARIMLGLAQASQPEAVQDFISAASRQMDNQRNLYFLWCEGENISPLPAGLKAKGLAMAPRRLFFIQATASSLPEYFIAADLIYLPMASDESQPSLAEIKQFRVPVISTLTDYDLITTLSNHHIF GT:EXON 1|1-711:0| BL:SWS:NREP 2 BL:SWS:REP 258->380|Y1607_METJA|4e-05|27.5|120/390| BL:SWS:REP 412->555|SPDLY_DANRE|5e-04|24.4|135/590| COIL:NAA 6 COIL:NSEG 1 COIL:REGION 460->465| SEG 87->105|llsdllaslaveavvvssl| BL:PDB:NREP 1 BL:PDB:REP 335->371|2jjmA|2e-04|45.9|37/359| RP:PDB:NREP 1 RP:PDB:REP 187->374|3c4qB|4e-14|22.0|173/393| RP:PFM:NREP 4 RP:PFM:REP 17->64|PF04616|3e-04|34.8|46/271|Glyco_hydro_43| RP:PFM:REP 238->287|PF10274|8e-04|36.0|50/182|ParcG| RP:PFM:REP 258->374|PF00534|4e-06|31.5|111/165|Glycos_transf_1| RP:PFM:REP 490->624|PF03249|7e-04|27.6|127/468|TSA| HM:PFM:NREP 2 HM:PFM:REP 255->390|PF00534|1.1e-10|30.1|133/172|Glycos_transf_1| HM:PFM:REP 415->495|PF04156|0.0001|20.8|48/191|IncA| GO:PFM:NREP 4 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF04616|IPR006710| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF04616|IPR006710| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| GO:PFM GO:0016021|"GO:integral to membrane"|PF03249|IPR004933| RP:SCP:NREP 2 RP:SCP:REP 262->410|2f9fA1|3e-16|21.0|138/166|c.87.1.8| RP:SCP:REP 565->695|2bfwA1|9e-04|9.8|131/196|c.87.1.8| HM:SCP:REP 10->427|2bisA1|5.4e-23|22.8|381/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN ---------------------------------1---------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------1-------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 457 STR:RPRED 64.3 SQ:SECSTR #######cTEcTTccTTcccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEcccccccccGGGGGGGHHHHHHHGGGGGGHHHH#########HHHHHHHHHHHTccccEEEEEHHHHHHHHHHHHHHHTccEEEEccccHHHHHcTTTHHHHHHHHHHHHTTccEEEEcccHHEEEEccHHHHHHHHHHHcHccGGGEEEccccccTTTcccccTHHHccEcccHHTHHHHHHHHTTcccccEEEEEEccccGGGcHHHHHHHHHHHHHHcTTccEEEEEEcHHTTcGGGEEEEccccHHHHHHHHHHcHHcEEEEccEccccccHHHHHHHHTTccEEEEccTTHHHHcccTTTEEEEcccccTTcccccHHHHHHHHHHHHHHHHTcTTHcTHHHHHHHHHHHHHTHHHHTcTTcHHTTHHHHHHHcTTTccTTcHHHHHHHHHHHHHHcHHHHHHHH############################################################################################################################################################################################################################################## DISOP:02AL 1-5, 518-558| PSIPRED ccccccccEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEcccccccccEEEccccccccHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHcccccccEEEEEccccHHHcccccccccccccccccccHHHHHHHcccccccEEEEEEEEccHHccHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHccEEcccccccHHHHHHHHHccEEEEEccccccccHHHHHHHHccccEEEEcccccHHHHccccEEEEEcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHccHHHHHHHHccHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccEEcccEEEEEEEHHHHcHHHHHHHHHHEEEcccccccccHHHHHHHccHHHHHHHHHHHHHHHcccccc //