[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58644.1
DDBJ      :             ABC transporter, inner membrane subunit
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  732/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:267 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  45->259 2r6gG1  f.58.1.1 * 3e-17 12.2 %
:HMM:PFM   81->262 PF00528 * BPD_transp_1 3.7e-30 30.4 171/185  
:BLT:SWISS 29->260 GSID_SALTY 2e-38 34.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58644.1 GT:GENE ABA58644.1 GT:PRODUCT ABC transporter, inner membrane subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2524296..2525099) GB:FROM 2524296 GB:TO 2525099 GB:DIRECTION - GB:PRODUCT ABC transporter, inner membrane subunit GB:PROTEIN_ID ABA58644.1 GB:DB_XREF GI:76883963 InterPro:IPR000515 LENGTH 267 SQ:AASEQ MKGAWLPMGILLAWAALALLGPWWGLKPNAIHLERILNPPCPESWLGFDDLGRPLWDRLVVGARTSFLVAVGVVATAGFLGTLVGTLSGYLGGWWDHGIARIMDIFLAFPGILLAIALAGILGPGIENVVFALAAVGWVGYARLARAQVLSLRHHEHIQAAIALGSGIPRIVGRHLLPLILAPLIVEATFGVAGVVVAEAGLSFLGLGVQPPAASWGSMIRDGTRYLLVAPHMVLAPGIALMLVVLAINLLGDWLRDRLDVRQSRRK GT:EXON 1|1-267:0| BL:SWS:NREP 1 BL:SWS:REP 29->260|GSID_SALTY|2e-38|34.5|232/303| TM:NTM 5 TM:REGION 10->32| TM:REGION 62->84| TM:REGION 110->132| TM:REGION 188->210| TM:REGION 230->252| SEG 9->26|gillawaalallgpwwgl| SEG 105->126|iflafpgillaialagilgpgi| SEG 186->201|veatfgvagvvvaeag| HM:PFM:NREP 1 HM:PFM:REP 81->262|PF00528|3.7e-30|30.4|171/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 45->259|2r6gG1|3e-17|12.2|213/284|f.58.1.1| OP:NHOMO 3247 OP:NHOMOORG 788 OP:PATTERN 44313132111111112232321133354142-----1------13-52-CA4-3333112--13-11 1113C453344-4113322-2211292222224333277919286B74345167632511552375577932222622323-411111--------2--------11--122222222211111111111111121455852216932212221122------22115222----------1-A5433441423666664564546445A66663654224C521222222E6155555555655556333121222331--2111--331111122243333333111-11-------122222222222223--221---11C262444345414222221111531239-11187631-282-2131164311----1121121GIP--4743A-AAAAA997AAL-44B43A3CON1-mRRXIGEVTLOOJ4-1149DA6AA6BB1111111122222319--------------------------------1-1BDBAC57777534444559955552566D64A7113341342243D5EQ241132242-------111211346132252223331111111211----13111-1--------12212221112-1211553121111131111111111111111111--132-1------77HB3877777777777-7777777777777777776ABAB83356666566666656566977667572-455555555555---11-1-11111-1647222-122111-412211111-21234232233557264442ABA1----1---254466666656677--1-------------11111111111111117-11--1----------------11111234438C866211 -------------------------------------------------------------------------------------------------------------------------------------------------------------------2------1--1---1-------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 263-267| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccccHHccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccc //