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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58670.1
DDBJ      :             Universal stress protein, UspA
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  51/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->149 1mjhB PDBj 3e-11 25.4 %
:RPS:PDB   5->148 2dumC PDBj 2e-19 24.1 %
:RPS:SCOP  5->148 1mjhA  c.26.2.4 * 2e-24 25.0 %
:HMM:SCOP  5->149 2gm3A1 c.26.2.4 * 2.4e-26 36.2 %
:RPS:PFM   6->149 PF00582 * Usp 2e-10 37.7 %
:HMM:PFM   5->148 PF00582 * Usp 4.8e-28 39.1 138/140  
:BLT:SWISS 5->149 Y531_METJA 1e-15 35.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58670.1 GT:GENE ABA58670.1 GT:PRODUCT Universal stress protein, UspA GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2553888..2554337) GB:FROM 2553888 GB:TO 2554337 GB:DIRECTION - GB:PRODUCT Universal stress protein, UspA GB:PROTEIN_ID ABA58670.1 GB:DB_XREF GI:76883989 InterPro:IPR006015 InterPro:IPR006016 LENGTH 149 SQ:AASEQ MSAEFKIIIVPIDGSESSQRAARFGDSLAKATGRKMRFLYVFPATPNEVVGMSQLSREDIERAKEESARRALDKAHRAIGDPEREIEEQVLFGDPAEEIIRYIDYLAEQSEQPLVVMGRRGLSRIESLLLGSVSEKVIRYANGAVTIVQ GT:EXON 1|1-149:0| BL:SWS:NREP 1 BL:SWS:REP 5->149|Y531_METJA|1e-15|35.3|139/170| BL:PDB:NREP 1 BL:PDB:REP 5->149|1mjhB|3e-11|25.4|138/144| RP:PDB:NREP 1 RP:PDB:REP 5->148|2dumC|2e-19|24.1|137/146| RP:PFM:NREP 1 RP:PFM:REP 6->149|PF00582|2e-10|37.7|138/139|Usp| HM:PFM:NREP 1 HM:PFM:REP 5->148|PF00582|4.8e-28|39.1|138/140|Usp| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF00582|IPR006016| RP:SCP:NREP 1 RP:SCP:REP 5->148|1mjhA|2e-24|25.0|136/143|c.26.2.4| HM:SCP:REP 5->149|2gm3A1|2.4e-26|36.2|141/0|c.26.2.4|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 123 OP:NHOMOORG 87 OP:PATTERN -----12121122111--111---1114-1421-1111-1---11---115581----------1--- -------------------------------------------------------------------------------1----------1----------------------------------1----11---1-------------------------------1------------------11-----1------------------------111-----------------------------------------------------1-122------------------------------------------------------------------------1---111211---1---------4------------------------------------------------------------------------------------------------------------------------------------------------1------------1------------1-------------------------------111------121---2--1111----------------------------------------------------------------21--------------------------------------------------111----------------1-------------------------------------1---------------------------------------------------------------------------------------11--11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 99.3 SQ:SECSTR ccccccEEEEEccccHHHHHHHHHHHHHccccccEEEEEEEEEGGGTccccccGGGGGGTHHHHHHHHHHHHHHHHHTTccEEEEEEEEEEEEcHHHHHHHHGG#HHHHHTccEEEEEccccccccTTcccHHHHHHHHHccccEEEEc DISOP:02AL 1-2| PSIPRED ccccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEccccccHHHHHEEcHHHHHHHHHccccEEEEc //