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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58671.1
DDBJ      :             Transposase, IS605 OrfB
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
g.72.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   109->191 3ee7B PDBj 5e-06 10.4 %
:RPS:SCOP  291->340 1wj0A  g.72.1.1 * 6e-08 14.0 %
:RPS:PFM   62->249 PF01385 * Transposase_2 2e-09 29.6 %
:RPS:PFM   286->347 PF07282 * Transposase_35 7e-09 41.9 %
:HMM:PFM   284->349 PF07282 * Transposase_35 1e-25 48.5 66/69  
:HMM:PFM   61->265 PF01385 * Transposase_2 1.1e-15 21.7 198/227  
:HMM:PFM   1->20 PF12323 * HTH_14 0.00034 35.0 20/46  
:BLT:SWISS 107->358 Y751_METJA 2e-16 27.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58671.1 GT:GENE ABA58671.1 GT:PRODUCT Transposase, IS605 OrfB GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2554495..2555610) GB:FROM 2554495 GB:TO 2555610 GB:DIRECTION - GB:PRODUCT Transposase, IS605 OrfB GB:PROTEIN_ID ABA58671.1 GB:DB_XREF GI:76883990 InterPro:IPR010095 LENGTH 371 SQ:AASEQ MKRTVSIKLVPTPEQAQALLELQSELAKACNLIVPFARDNRCWNRVALHHLAYYPVREATRLGSQMVCNAVKAVADAYKVLKLGRHDEIPVIRFRETGSVHFDARTYRLKGDAVSLYTLTGRAIVKMSPGEFQAQYLAAGKPKEGKLVRRGKQWFFNLVLDWPDTAPAKGSGILGIDLGENNLASTSSGKILGGGPLRHVRDRHLALRRRLQSNGRQSARQLLKKVSGKERRHMRQVNHEASKAMVGEALKQGASTIVLETLTHIRKRIKGGKRLRARLHRWAWRELQDFIAYKAEAAGIRVIYVNPAYSSKSCSACGCLGSRIQHKFSCSSCGHLAHSDRNAAVNLAKLAKSIGIARLGVAPAHVAVPTH GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 107->358|Y751_METJA|2e-16|27.5|247/278| SEG 14->27|eqaqallelqsela| SEG 265->285|irkrikggkrlrarlhrwawr| RP:PDB:NREP 1 RP:PDB:REP 109->191|3ee7B|5e-06|10.4|77/115| RP:PFM:NREP 2 RP:PFM:REP 62->249|PF01385|2e-09|29.6|179/207|Transposase_2| RP:PFM:REP 286->347|PF07282|7e-09|41.9|62/70|Transposase_35| HM:PFM:NREP 3 HM:PFM:REP 284->349|PF07282|1e-25|48.5|66/69|Transposase_35| HM:PFM:REP 61->265|PF01385|1.1e-15|21.7|198/227|Transposase_2| HM:PFM:REP 1->20|PF12323|0.00034|35.0|20/46|HTH_14| RP:SCP:NREP 1 RP:SCP:REP 291->340|1wj0A|6e-08|14.0|50/58|g.72.1.1| OP:NHOMO 294 OP:NHOMOORG 83 OP:PATTERN --------7-21--4--1------3676556H----12-----------3114-12----1-134--- ---------------------1----------------2----2----------------------1-1---------------------------------------3---------------------------1-----------6-121Bk-------------1---------------5------26------52-----122------1-1U7---1-------1------------------------------6-----1--1---------------------------------------------------1----------1-1---11-----2--1--------1------1-------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------1--1----------------------------------------------------------------------------------------------------------------------5-------------------------------1---------------------1---1-------1-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-61445--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 77 STR:RPRED 20.8 SQ:SECSTR ############################################################################################################cccccEEEEEEEccccccEE######EEEcTTcccEEEEEccccEEEEccTTccEEEEEEEcTTccHHHHHHHHHHHHccccc#################################################################################################################################################################################### DISOP:02AL 212-215, 360-371| PSIPRED cEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccEEEEcccEEEEEEEEcEEEEEEEcEEEEEEEccccEEEEEEEEEEccEEEEEEEEEEccccccccccEEEEEccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccccEEEEccccEEEEcHHHHHHHHHHHccccccccccccccccccccc //