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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58723.1
DDBJ      :             conserved hypothetical protein, AsmA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  222/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:812 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   43->219 PF05170 * AsmA 1e-23 38.3 %
:RPS:PFM   457->642 PF05170 * AsmA 8e-19 31.2 %
:HMM:PFM   13->683 PF05170 * AsmA 4.2e-85 24.7 579/604  
:HMM:PFM   685->780 PF06585 * JHBP 4e-05 21.3 94/248  
:BLT:SWISS 43->323 ASMA_ECOLI 2e-08 24.9 %
:BLT:SWISS 443->755 ASMA_ECOLI 8e-17 21.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58723.1 GT:GENE ABA58723.1 GT:PRODUCT conserved hypothetical protein, AsmA GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2612087..2614525 GB:FROM 2612087 GB:TO 2614525 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein, AsmA GB:PROTEIN_ID ABA58723.1 GB:DB_XREF GI:76884042 InterPro:IPR007844 LENGTH 812 SQ:AASEQ MSKQKTYKEPLSMKKFLKILFSTLLVIILLIVIAAVVLPFVIDPNDFKPQITAQVEKATGRELTLGGDIKLSVFPWLGVDVKEVSLSNAPGFGKTPFAKVSDMEVRVKLMPLLEKHLVMDTVVLNGLDLNLARNAQGKTNWADLAAGESQQTPSQEETATEGESPPPLAGIAIAGLKIEAARIDWRDEVKDVRYTIKKLNLDTDPLVPGEPTQIKLDFDFVASQPDVHGHLDFGGKVTADMEANHYLLQNTDLQLTAAGPALPIEQLALQLNADIDAFLAKQQLTVSDLKLTSQVKGEQEVQLTLNTSLEGNLAAQQYHLNDLQLETQVETPQFPEPINATLATTASLDLNGETLALQDLSLATLGIKLKGQIKGANILTDPNFKGQLVSNQFNPRHAAEALALELPPTGDKSALSKARLALKFSASPQDFDAKALAAKLDDSTLKGAVAVRNFQQPAIRFNLALDTINLDRYLPPPSEKTSQSPPPAPTSPGSAAAGAASLPLDALRALNASGTFKISELTVNGVHSEGIRITLAAKDGLVKLHPLSAKLYQGSYTGNIRLDARNTPPKLAIDEKLAGVKAGPLLQDLTGDGKITGTANINATLTATGATPKAIQRTLNGTAGFSFTDGAVKGINIARLIREAKATLEGKQLPPNREPEQTDFALLEGTIAATNGILRNNDLKAQSPFLRVQGQGTANLVQEDLDYQLKVAIVKTPKGQGGEGLAKLKGITIPIKISGTFTQPKYGIDLESLIKARAGKLIEENKQDIQKELEKKLDKLLGTESDQGNGETPSSPEQQLKEELKNKLKGIF GT:EXON 1|1-812:0| BL:SWS:NREP 2 BL:SWS:REP 43->323|ASMA_ECOLI|2e-08|24.9|242/617| BL:SWS:REP 443->755|ASMA_ECOLI|8e-17|21.3|310/617| TM:NTM 1 TM:REGION 21->43| SEG 24->42|llviilliviaavvlpfvi| SEG 398->406|aaealalel| SEG 430->442|dfdakalaakldd| SEG 481->504|tsqspppaptspgsaaagaaslpl| SEG 771->781|kelekkldkll| SEG 797->809|eqqlkeelknklk| RP:PFM:NREP 2 RP:PFM:REP 43->219|PF05170|1e-23|38.3|162/396|AsmA| RP:PFM:REP 457->642|PF05170|8e-19|31.2|184/396|AsmA| HM:PFM:NREP 2 HM:PFM:REP 13->683|PF05170|4.2e-85|24.7|579/604|AsmA| HM:PFM:REP 685->780|PF06585|4e-05|21.3|94/248|JHBP| OP:NHOMO 240 OP:NHOMOORG 223 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------22222-21222--------------1-------1-----------11-1111-1-1111111--------1-1--112------------1----1111-11-----------11111-----------11-1-------------11----1-----------1-111111111111--1----11-1112-12112--1-1-1--------------------------------------111-1----111111111111111111111---1121------11-11111111111111-1111111111111111111111111111111111111111111111111111-1-------------1111111-----1-11-------------------------1111111111111111111---------111121111111121----------------1-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-10, 145-167, 413-420, 480-497, 766-774, 784-804| PSIPRED ccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHHHHHHHccEEEEEEEEEEEEcccEEEEEEEEEEEcccccccccEEEEEEEEEEEEEHHHHcccEEEEEEEEEEEEEEEEEcccccccHHHHcccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEcccccEEEEEEcEEEEccccccccccEEEEEEEEccccEEEEEEEEEEEEcccHHHHHHHHccccccEEEEcccccccEEEEEEEEEEcccccccEEEEccEEEEEcccccccccccccccccccccHHHccccccHHccccccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEccccEEcccccEEEEEcccccHHHHHHccccccccccccccccEEEEEEEEEccccEEEEEEEEEEccEEEEEEEEEEcccccEEEEEEEEcccccHHHcccccccccccccccccccccccccccccccHHHHcccccEEEEEEEEEEccEEcccEEEEEEEEccEEEEEEccccccccEEEEEEEEEEccccEEEEEEEEEEcccHHHHHHHcccccEEEEEEEEEEEEEEccccHHHHHHcccEEEEEEEcccEEEcccHHHHHHHHHHHccccccccccccccEEEEEEEEEEEEEccEEEcccEEEEEccEEEEEEEEEEEcccEEEEEEEEEEccccccccccccHHHcEEEEEEEEEEcHHccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccc //