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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58805.1
DDBJ      :             UDP-N-acetylmuramate, L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  858/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.5.1c.59.1c.72.2
:460 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->453 3hn7A PDBj 4e-99 50.8 %
:RPS:PDB   13->449 2am1A PDBj 1e-57 16.7 %
:RPS:SCOP  2->88 1gqqA1  c.5.1.1 * 4e-19 27.1 %
:RPS:SCOP  107->313 1j6uA3  c.72.2.1 * 3e-33 23.3 %
:RPS:SCOP  314->454 1gqqA2  c.59.1.1 * 2e-20 24.3 %
:HMM:SCOP  1->90 1j6uA1 c.5.1.1 * 1.4e-22 36.4 %
:HMM:SCOP  87->313 1j6uA3 c.72.2.1 * 1.8e-52 35.4 %
:HMM:SCOP  314->453 1p3dA2 c.59.1.1 * 3.4e-36 36.7 %
:RPS:PFM   108->294 PF08245 * Mur_ligase_M 7e-10 31.7 %
:RPS:PFM   318->389 PF02875 * Mur_ligase_C 6e-10 45.1 %
:HMM:PFM   108->295 PF08245 * Mur_ligase_M 3e-21 27.1 181/188  
:HMM:PFM   2->99 PF01225 * Mur_ligase 2.2e-17 32.4 71/76  
:HMM:PFM   315->382 PF02875 * Mur_ligase_C 7.1e-15 38.2 68/91  
:BLT:SWISS 1->458 MPL_ECOLI e-144 56.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58805.1 GT:GENE ABA58805.1 GT:PRODUCT UDP-N-acetylmuramate, L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2691081..2692463) GB:FROM 2691081 GB:TO 2692463 GB:DIRECTION - GB:PRODUCT UDP-N-acetylmuramate, L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase GB:PROTEIN_ID ABA58805.1 GB:DB_XREF GI:76884124 InterPro:IPR000713 InterPro:IPR004101 InterPro:IPR005757 LENGTH 460 SQ:AASEQ MHLHILGICGTFMAGLALLARERGFHVSGSDASVYPPMSEQLQAAGIGIHEGYSAAALDPPPDLVVIGNALSRGNPAVEYVLAQGLPYTSGPQWLAEQILQGRWVLAVAGTHGKTTASSLLAWILEYAGHGPGYLIGGVPQNFGASARLGRSPYFVVEADEYDTAFFDKRSKFIHYRPRTLILNNLEYDHADIFPHLEAIQQQFHYLVRTVPNNGLILVPSGDKALATVLSMGCWTPVVNMGIAGGVGSALAARAVADDGSNFEVWYENSCQGQVHWPLLGHHNVANGLAAIGAARHAGVPIGQGCQALERFQGVRRRLEVCGKVNGVTVYDDFAHHPTAISKTLAGLRARVGKARIIAVLEPRSNTMKLGVHKDSLAPALALADRVLIYQPSDIKWSLIPIVHALGPNKASAFFDIQAIVDNLRTYVQGGDHIVLMSNGNFSHIQQQLLKALREEGEGR GT:EXON 1|1-460:0| BL:SWS:NREP 1 BL:SWS:REP 1->458|MPL_ECOLI|e-144|56.7|453/457| BL:PDB:NREP 1 BL:PDB:REP 2->453|3hn7A|4e-99|50.8|431/465| RP:PDB:NREP 1 RP:PDB:REP 13->449|2am1A|1e-57|16.7|419/442| RP:PFM:NREP 2 RP:PFM:REP 108->294|PF08245|7e-10|31.7|180/187|Mur_ligase_M| RP:PFM:REP 318->389|PF02875|6e-10|45.1|71/84|Mur_ligase_C| HM:PFM:NREP 3 HM:PFM:REP 108->295|PF08245|3e-21|27.1|181/188|Mur_ligase_M| HM:PFM:REP 2->99|PF01225|2.2e-17|32.4|71/76|Mur_ligase| HM:PFM:REP 315->382|PF02875|7.1e-15|38.2|68/91|Mur_ligase_C| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| GO:PFM GO:0005524|"GO:ATP binding"|PF02875|IPR004101| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02875|IPR004101| GO:PFM GO:0016874|"GO:ligase activity"|PF02875|IPR004101| RP:SCP:NREP 3 RP:SCP:REP 2->88|1gqqA1|4e-19|27.1|85/89|c.5.1.1| RP:SCP:REP 107->313|1j6uA3|3e-33|23.3|189/207|c.72.2.1| RP:SCP:REP 314->454|1gqqA2|2e-20|24.3|140/154|c.59.1.1| HM:SCP:REP 1->90|1j6uA1|1.4e-22|36.4|88/0|c.5.1.1|1/1|MurCD N-terminal domain| HM:SCP:REP 87->313|1j6uA3|1.8e-52|35.4|206/0|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 314->453|1p3dA2|3.4e-36|36.7|139/0|c.59.1.1|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1228 OP:NHOMOORG 868 OP:PATTERN -------------------------------------------------------------------- 2211111111111111111-111111111111111111111112111111111111111111-111211111111111111111111111-122111--222223222221111111111111122222222222211111---111111111111111111111111111111-11111-11111--1111111111111111111111111111112112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111-111211111222222122112211111111111-111111112111122111111121111211111211111111111111111121121--------11111111111111111111231212222222222222222222222222222222222222222222222222222222222223222222222222222112111111111111111122222212111111-1-111111-111111111222222222222222222222222222222221-12222-1-11122222222222222222-22222222222222222222222222222212222222222122222222221222222222222111211111222222221222222222222222222222322222222222222222222222222122222222222222222222222222222222211212222221112111111--------------------------111--11111222 -----------------------1-11----------------------------------------------------------------------------------------------------------------------------------------1---------1----1------1--1--2--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 455 STR:RPRED 98.9 SQ:SECSTR #EEEEEccccHHHHHHHHHHTcccccTTccccccccTTcEEccccccccGGGGHHHHHHHTccEEEEEcTTccccccccEEEcccHHHHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHTTTccEEEccTcccTTHHHHHHHTcTTccEEEEEccccTTHHHHHHHGGGHHcccEEEEccccccccTTcccHHHHHHHHGHHHGGTTcTTcEEEEEccGGGGGGcccccEEEEEEEcccccTTccccEEEEEEccccEEEEETTTcccEEEEccccHHHHHHHHHHHHHHHHTTccHHHHHHHGGGcccccccccEEccTTTcEEEEEcccccHHHHHHHTTcccccccEEEEEEEcccccTTHHHHHHHGGGccTTTccEEEEEEcTTHHHHHccTTcEEEEEccccccTHHHHHHHHHHHccTTEEEEEEcccHHHHHHHHHETTEEEE#### DISOP:02AL 456-460| PSIPRED cEEEEEEEcHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHcccEEEEcccHHHHcccccEEEEccccccccHHHHHHHHccccEEcHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEEEEccHHHHHHHHHHHHHEEcccEEEEEcccHHHHHHcccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEcccEEEEEEEcccEEEEEEEEcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccEEEEEccccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHccccEEEEccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHcccc //