[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58827.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  407/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
e.32.1
:647 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   70->456 2d4yA PDBj 6e-28 25.0 %
:RPS:PDB   70->483 2d4yA PDBj 4e-25 26.5 %
:RPS:PDB   538->640 3e66A PDBj 3e-07 11.7 %
:HMM:SCOP  167->645 1ucuA_ e.32.1.1 * 9e-39 28.5 %
:RPS:PFM   606->642 PF06429 * DUF1078 1e-04 51.4 %
:HMM:PFM   606->643 PF06429 * DUF1078 9.9e-17 55.3 38/39  
:HMM:PFM   9->36 PF00460 * Flg_bb_rod 7e-11 46.4 28/31  
:HMM:PFM   93->207 PF04513 * Baculo_PEP_C 1.3e-06 22.2 99/140  
:BLT:SWISS 18->535 FLGK_ECOLI 3e-58 31.3 %
:BLT:SWISS 538->646 FLGK_BACSU 2e-08 26.4 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58827.1 GT:GENE ABA58827.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2716002..2717945) GB:FROM 2716002 GB:TO 2717945 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58827.1 GB:DB_XREF GI:76884146 InterPro:IPR001444 InterPro:IPR002371 InterPro:IPR010930 LENGTH 647 SQ:AASEQ MASSDLLGIGASGLLAAQRALATTSHNIANVNTPGFSRQRTELAARLPEFTGQGFIGTGVDVTTVRRAYDSFLTEQARYSTSEYAQSKVFHDLAAQVDNLFADSDTGLSASSQRFFNATQELANDPSSSAARQVLLAEGGAFAARVHSLGDRLGELDEDVNTRLRDTVAEVNTLSSSIAGLNQQIRDLRGQNNNQPPNDLLDQRDQLIQDLSQKAAVTVLPQDDGSLNVFIGKGQSLVTGDHSHSLTTLANPYEASRLEVGYAAKGGVAPISDSIQGGELGALLSFRDEVLSSSRNALGQLAVGVAQSFNEQHRLGVDLQGELGGDFFAAIDSNTAVSLPRADNTGDGVIEIAINDASKLTDSDYRLDRNGAGFTLTRLSDNQAFSLSTFPGSAETVDGLTLNLTSGSINGGDSYLIQPTRAAAQQFGVMLTDSARIAAAGPIRTEANLGNRGTGQVSAAAVTATAGLPLPSNGEVTLTYDAAARQFNVSGGPGGTLDFDPATESNGKEFHLPSVGGLNFTVSGVPADGDTFMLQNNTGGVGDNRNALSLAGLQTKPVFQDGTTTYQEQYGRLVADVGARTRQAEANQDTHKTLLDQAVAAREGVSGVNLEEEAANLIRFQQAFQAAARVISTADTMFQTLLGAVGR GT:EXON 1|1-647:0| BL:SWS:NREP 2 BL:SWS:REP 18->535|FLGK_ECOLI|3e-58|31.3|499/547| BL:SWS:REP 538->646|FLGK_BACSU|2e-08|26.4|109/507| COIL:NAA 37 COIL:NSEG 1 COIL:REGION 158->194| SEG 2->17|assdllgigasgllaa| SEG 199->213|dlldqrdqliqdlsq| SEG 620->628|fqqafqaaa| BL:PDB:NREP 1 BL:PDB:REP 70->456|2d4yA|6e-28|25.0|372/429| RP:PDB:NREP 2 RP:PDB:REP 70->483|2d4yA|4e-25|26.5|400/429| RP:PDB:REP 538->640|3e66A|3e-07|11.7|103/255| RP:PFM:NREP 1 RP:PFM:REP 606->642|PF06429|1e-04|51.4|37/39|DUF1078| HM:PFM:NREP 3 HM:PFM:REP 606->643|PF06429|9.9e-17|55.3|38/39|DUF1078| HM:PFM:REP 9->36|PF00460|7e-11|46.4|28/31|Flg_bb_rod| HM:PFM:REP 93->207|PF04513|1.3e-06|22.2|99/140|Baculo_PEP_C| GO:PFM:NREP 1 GO:PFM GO:0019861|"GO:flagellum"|PF06429|IPR010930| HM:SCP:REP 167->645|1ucuA_|9e-39|28.5|362/0|e.32.1.1|1/1|Phase 1 flagellin| OP:NHOMO 450 OP:NHOMOORG 409 OP:PATTERN -------------------------------------------------------------------- -11-------------------------------------1---1---1---------------1--------------------111--------------------1------------------------------------1---------------------------------------------1111111111111111111111111111111111------11------------------------------------------------------------------------------------------11111111111111121111---212--12-1-111111111111111--111-111---------2-1-11111------------11111111--1---------------1----11111------------------1--------------------------------11-111111111211111111111112111111111--211111111--111111111121-------111-11111-11111131121111111121------1-1-11------11111111111111---12-111111111211121211121-22221---11111--11121111111111111111-1211211111112111111---1111111-1111111111111111----111122222222221---------1111--111-------------------------1111111111211111111---------1111211111221111111111112------111111111111111111--------------------------1-11111111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 556 STR:RPRED 85.9 SQ:SECSTR #####################################################################cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTcHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccHHHHHHHHHHHHHHHHccEEEEEETTTEEEEEETTccEEEETTEEccEEEEEccccTTcEEEEEEETTEEEccGGGGccHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTcccTTcccccccEEccccEEEEcTTTTcccTTcccEEEEccGGGcccccEEEEEccccEEEEETTTccEEEcEEcTTccEEETTEEEEccEccccTTEEEEEEccTTTTTTcEEccccGGGccccccccccccHHHHHHHGGGGcccEEEcTTTccHHHHHHHHHHHH##EEcTTccEEEEEEEEEcTTEEEEEEEETTccEEEEEEEE#############cTTTGGGGGccccEEEEETTccEEEEEEcTTccEEEEEEcEEEEEEcTTTcEEEEGGGTTTcccHHHHHHHHHHHHHHHHHHHccGGGcccEEEEccGGGHHH####### DISOP:02AL 268-276, 583-592| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEcccccccccEEcccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccEEEEEcccccEEEEEcccEEEEEcccEEEEEEEEccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEEEccccccccccEEEEcccccEEEEccccEEEEEEcccccccEEcEEEEEEccccccccccEEEEEccHHHHHHHHHHHHHHHHHccccEEEEEccccccEEEEEEccccccccccccccccEEEEEcccccccEEcccccccccccccccccccccEEccccccEEEEcccccccccEEEcccccccccHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //