[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58866.1
DDBJ      :             Cytochrome c, class I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:117 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->107 1wveC PDBj 4e-20 54.9 %
:RPS:PDB   36->107 1diqC PDBj 3e-09 54.2 %
:RPS:SCOP  36->102 1diiC  a.3.1.1 * 3e-08 55.2 %
:HMM:SCOP  35->107 1diqC_ a.3.1.1 * 1.8e-14 35.6 %
:HMM:PFM   38->104 PF00034 * Cytochrom_C 0.00014 26.9 67/91  
:BLT:SWISS 11->111 CY4C_PSEPU 4e-22 47.5 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58866.1 GT:GENE ABA58866.1 GT:PRODUCT Cytochrome c, class I GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2756355..2756708) GB:FROM 2756355 GB:TO 2756708 GB:DIRECTION - GB:PRODUCT Cytochrome c, class I GB:PROTEIN_ID ABA58866.1 GB:DB_XREF GI:76884185 InterPro:IPR003088 LENGTH 117 SQ:AASEQ MVASAKRITAKWSLVVGISSLACLLPPTAWAGADGSWKNGAEVYAKVCGYCHEGGIIGPVLKGRELPPAYIVQVVRNGLLAMPAFTAAFIDDKALREVADYLSKSAAESKEGGENGR GT:EXON 1|1-117:0| BL:SWS:NREP 1 BL:SWS:REP 11->111|CY4C_PSEPU|4e-22|47.5|101/113| TM:NTM 2 TM:REGION 8->30| TM:REGION 48->70| BL:PDB:NREP 1 BL:PDB:REP 37->107|1wveC|4e-20|54.9|71/75| RP:PDB:NREP 1 RP:PDB:REP 36->107|1diqC|3e-09|54.2|72/74| HM:PFM:NREP 1 HM:PFM:REP 38->104|PF00034|0.00014|26.9|67/91|Cytochrom_C| RP:SCP:NREP 1 RP:SCP:REP 36->102|1diiC|3e-08|55.2|67/73|a.3.1.1| HM:SCP:REP 35->107|1diqC_|1.8e-14|35.6|73/74|a.3.1.1|1/1|Cytochrome c| OP:NHOMO 9 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-----------------------------------------------1--------------------1111----------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 94 STR:RPRED 80.3 SQ:SECSTR #####################HHHccccccGGGccccccHHHHHHHTTHHHHTTTccccccTTccccHHHHHHHHHHccTTcccccTTTccHHHHHHHHHHHHTcccccGGGcTH## DISOP:02AL 1-3, 32-34, 105-117| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccc //