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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58884.1
DDBJ      :             Superoxide dismutase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  772/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
a.2.11d.352.1d.44.1
:193 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->189 1dt0C PDBj 4e-78 67.6 %
:RPS:PDB   3->193 2bpiA PDBj 2e-81 54.5 %
:RPS:SCOP  5->108 2hc5A1  d.352.1.1 * 1e-32 12.9 %
:RPS:SCOP  85->192 1ap5A2  d.44.1.1 * 1e-32 47.2 %
:HMM:SCOP  1->83 1gv3A1 a.2.11.1 * 1.9e-37 54.2 %
:HMM:SCOP  87->194 1y67A2 d.44.1.1 * 2.8e-44 58.9 %
:RPS:PFM   5->82 PF00081 * Sod_Fe_N 4e-23 62.8 %
:RPS:PFM   88->187 PF02777 * Sod_Fe_C 2e-36 65.0 %
:HMM:PFM   87->190 PF02777 * Sod_Fe_C 1.3e-48 67.3 104/106  
:HMM:PFM   2->81 PF00081 * Sod_Fe_N 1.5e-36 50.0 80/82  
:BLT:SWISS 1->191 SODF_LEGPH 1e-84 70.2 %
:PROS 157->164|PS00088|SOD_MN

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58884.1 GT:GENE ABA58884.1 GT:PRODUCT Superoxide dismutase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2775348..2775929 GB:FROM 2775348 GB:TO 2775929 GB:DIRECTION + GB:PRODUCT Superoxide dismutase GB:PROTEIN_ID ABA58884.1 GB:DB_XREF GI:76884203 InterPro:IPR001189 LENGTH 193 SQ:AASEQ MTHRLPELPYALNALEPHISQETLEYHYGKHHQTYVDKLNGLVPGTEFENASLEEIITKASGTLFNNGAQVWNHTFYWNCLTPQGGGEPSGALLEAIEKNFGSFSDFKEKFSQSATTLFGSGWAWLVKNSDGSLDIVGTSNAGNPLTEGKTPLLTCDVWEHAYYIDYRNARPKYLEAFWKLANWDFVAKNLAN GT:EXON 1|1-193:0| BL:SWS:NREP 1 BL:SWS:REP 1->191|SODF_LEGPH|1e-84|70.2|191/192| PROS 157->164|PS00088|SOD_MN|PDOC00083| BL:PDB:NREP 1 BL:PDB:REP 5->189|1dt0C|4e-78|67.6|185/195| RP:PDB:NREP 1 RP:PDB:REP 3->193|2bpiA|2e-81|54.5|191/197| RP:PFM:NREP 2 RP:PFM:REP 5->82|PF00081|4e-23|62.8|78/82|Sod_Fe_N| RP:PFM:REP 88->187|PF02777|2e-36|65.0|100/104|Sod_Fe_C| HM:PFM:NREP 2 HM:PFM:REP 87->190|PF02777|1.3e-48|67.3|104/106|Sod_Fe_C| HM:PFM:REP 2->81|PF00081|1.5e-36|50.0|80/82|Sod_Fe_N| GO:PFM:NREP 8 GO:PFM GO:0004784|"GO:superoxide dismutase activity"|PF00081|IPR019831| GO:PFM GO:0006801|"GO:superoxide metabolic process"|PF00081|IPR019831| GO:PFM GO:0046872|"GO:metal ion binding"|PF00081|IPR019831| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00081|IPR019831| GO:PFM GO:0004784|"GO:superoxide dismutase activity"|PF02777|IPR019832| GO:PFM GO:0006801|"GO:superoxide metabolic process"|PF02777|IPR019832| GO:PFM GO:0046872|"GO:metal ion binding"|PF02777|IPR019832| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02777|IPR019832| RP:SCP:NREP 2 RP:SCP:REP 5->108|2hc5A1|1e-32|12.9|101/109|d.352.1.1| RP:SCP:REP 85->192|1ap5A2|1e-32|47.2|108/115|d.44.1.1| HM:SCP:REP 1->83|1gv3A1|1.9e-37|54.2|83/102|a.2.11.1|1/1|Fe,Mn superoxide dismutase (SOD), N-terminal domain| HM:SCP:REP 87->194|1y67A2|2.8e-44|58.9|107/0|d.44.1.1|1/1|Fe,Mn superoxide dismutase (SOD), C-terminal domain| OP:NHOMO 1522 OP:NHOMOORG 997 OP:PATTERN 11----1111111111-1--1---12221221--1--------2--111-111--------111--12 111--11111111121111-1-1112111111-1111211-111112-111111111111---11121211-----------111-111111-1111--112211312121111111111111111111111112111111--12121222221111----1111222231------------11111---122333333333333333322222333222111111111131122222222222222111111---11-----------1-----11111111111111111111111111111111111111111111111-1-12222222222211222111111--2--1122-211-1-1------1211122111111112111121212211111111112-111113111111133111111111211211111111111111111111111112111111111111111111111111111111-11221122221111111111111111111111511111-111111211212121111211121-1111111111112---1-31-1-111-1-1-11---111111121111111111111111111112-----2211111211111111111111111111111-1111111-11121111212222222222-222222222222222222222211212222222222222222222222222112222222222221111111111111211211111111111111111111113111122222222212222122211111111111112222222222233232333332222---111----11111111--11112-----------------------1-------221 2211221-B45-3B223222333332333332322222222222321233333323233222212-1111112121111112221123-4533333111111321211242131112111-13111111483-3131-1111111111--2111111121112311111331233367171115633863732442212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 193 STR:RPRED 100.0 SQ:SECSTR cccccccccccTTTTTTTccHHHHHHHHHTHHHHHHHHHHHHHTTcTTTTccHHHHHHHccHHHHHHHHHHHHHHHHHHTccTTccccccTHHHHHHHHHHccHHHHHHHHHHHHHHccccEEEEEEEcTTccEEEEEEETTccHHHHTcEEEEEEEccGGGTHHHHTTcHHHHHHHHTTTccHHHHHHHHHH DISOP:02AL 84-91| PSIPRED ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccccccccEEEEEEEHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHcc //