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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58903.1
DDBJ      :             PAS/PAC sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  818/915 : Eukaryota  111/199 : Viruses  1/175   --->[See Alignment]
a.30.2d.110.3d.122.1
:499 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->140 1y28A PDBj 2e-09 25.6 %
:BLT:PDB   148->262 1d06A PDBj 4e-29 47.8 %
:BLT:PDB   280->496 3dgeA PDBj 1e-24 36.9 %
:RPS:PDB   9->127 1d06A PDBj 2e-13 22.7 %
:RPS:PDB   129->189 2btvA PDBj 9e-07 8.6 %
:RPS:PDB   172->499 3crlA PDBj 9e-37 13.2 %
:RPS:SCOP  11->127 1s66L  d.110.3.2 * 1e-20 23.1 %
:RPS:SCOP  146->262 1s66L  d.110.3.2 * 3e-33 30.8 %
:RPS:SCOP  258->344 2c2aA1  a.30.2.1 * 2e-11 20.7 %
:RPS:SCOP  343->498 1bxdA  d.122.1.3 * 7e-25 22.3 %
:HMM:SCOP  20->135 1dp6A_ d.110.3.2 * 5e-18 31.2 %
:HMM:SCOP  159->269 1dp6A_ d.110.3.2 * 2.8e-30 42.3 %
:HMM:SCOP  258->342 2c2aA1 a.30.2.1 * 5.3e-16 30.6 %
:HMM:SCOP  342->496 1gkzA2 d.122.1.4 * 3.5e-40 35.3 %
:RPS:PFM   10->116 PF00989 * PAS 5e-09 27.1 %
:RPS:PFM   150->261 PF00989 * PAS 3e-15 42.6 %
:RPS:PFM   390->497 PF02518 * HATPase_c 2e-14 39.4 %
:HMM:PFM   11->126 PF00989 * PAS 3.6e-13 22.9 109/113  
:HMM:PFM   149->261 PF00989 * PAS 3.5e-21 29.1 110/113  
:HMM:PFM   386->496 PF02518 * HATPase_c 6.9e-25 38.3 107/111  
:HMM:PFM   277->342 PF00512 * HisKA 4.5e-15 38.5 65/68  
:BLT:SWISS 14->141 FIXL_AZOC5 2e-10 24.2 %
:BLT:SWISS 152->494 FIXL_AZOC5 6e-47 35.9 %
:REPEAT 2|11->134|150->269
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58903.1 GT:GENE ABA58903.1 GT:PRODUCT PAS/PAC sensor signal transduction histidine kinase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2795124..2796623 GB:FROM 2795124 GB:TO 2796623 GB:DIRECTION + GB:PRODUCT PAS/PAC sensor signal transduction histidine kinase GB:PROTEIN_ID ABA58903.1 GB:DB_XREF GI:76884222 InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001610 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 LENGTH 499 SQ:AASEQ MLSRLLRVESFKHLLESASNALLISDHKGQIVFSNTALEKCFGYTGKELLGLTIEDLIPKRFRLQHKTYHADYIASSHLHGTHQGLSDTLKPLGLHKNGTEFPLEVSLIPLETSTGLYVLSIIQDITPQRSAEEAPSQYQALAWESKARLQAILNTATDGIIVIDENGIIETFNPGAERLFGYKAAEAIGQNILILMPSPHREQGTGYIERYLQTGQGEFIGASRETTGMRKNGSTFPIDISISEMRLGERRLFTGIVRDITERHHFKELEEKNAELERFIYTVSHDLRSPLITIQGFSGMLKQSFTQHNQEQILEDIGRIQAAAGKMQLLLDDLLELSRIGRLLNRPEKFSLSDLVHEAIELVQGAITKGGVQIKVAPTLPHLFGDRRRLLEVMQNLIENAVKFMGDQKAPRIEINAYEEEGKLLCYVRDNGMGINPRYHDKIFNLFDSLHQSVEGTGIGLAIVKRIIEVHKGHVWVQSAGVVGQGSTFYFSLPRAPD GT:EXON 1|1-499:0| BL:SWS:NREP 2 BL:SWS:REP 14->141|FIXL_AZOC5|2e-10|24.2|124/504| BL:SWS:REP 152->494|FIXL_AZOC5|6e-47|35.9|329/504| NREPEAT 1 REPEAT 2|11->134|150->269| SEG 330->338|lllddllel| BL:PDB:NREP 3 BL:PDB:REP 20->140|1y28A|2e-09|25.6|117/119| BL:PDB:REP 148->262|1d06A|4e-29|47.8|115/130| BL:PDB:REP 280->496|3dgeA|1e-24|36.9|214/237| RP:PDB:NREP 3 RP:PDB:REP 9->127|1d06A|2e-13|22.7|115/130| RP:PDB:REP 129->189|2btvA|9e-07|8.6|58/845| RP:PDB:REP 172->499|3crlA|9e-37|13.2|319/381| RP:PFM:NREP 3 RP:PFM:REP 10->116|PF00989|5e-09|27.1|99/112|PAS| RP:PFM:REP 150->261|PF00989|3e-15|42.6|108/112|PAS| RP:PFM:REP 390->497|PF02518|2e-14|39.4|104/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 11->126|PF00989|3.6e-13|22.9|109/113|PAS| HM:PFM:REP 149->261|PF00989|3.5e-21|29.1|110/113|PAS| HM:PFM:REP 386->496|PF02518|6.9e-25|38.3|107/111|HATPase_c| HM:PFM:REP 277->342|PF00512|4.5e-15|38.5|65/68|HisKA| GO:PFM:NREP 3 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 4 RP:SCP:REP 11->127|1s66L|1e-20|23.1|113/119|d.110.3.2| RP:SCP:REP 146->262|1s66L|3e-33|30.8|117/119|d.110.3.2| RP:SCP:REP 258->344|2c2aA1|2e-11|20.7|87/89|a.30.2.1| RP:SCP:REP 343->498|1bxdA|7e-25|22.3|148/161|d.122.1.3| HM:SCP:REP 20->135|1dp6A_|5e-18|31.2|112/0|d.110.3.2|1/2|PYP-like sensor domain (PAS domain)| HM:SCP:REP 159->269|1dp6A_|2.8e-30|42.3|111/0|d.110.3.2|2/2|PYP-like sensor domain (PAS domain)| HM:SCP:REP 258->342|2c2aA1|5.3e-16|30.6|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 342->496|1gkzA2|3.5e-40|35.3|150/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 9975 OP:NHOMOORG 957 OP:PATTERN -----------------------3N55A4CBF--31-122224AK-6I7KO9C--------------4 FWq3933444432226622-241125222223546421234766722123-3478233--33C2A1445731---222128461-524SSfN-c--1--D3V8D9ofhNX--------------1111A44357N5becWPI9Dn2yTkqRQCAA89212432IT8Squ*F231222232222RE933243AA9NNNNPLNLHNPQOPM9C77A7NQV876B5HD444445WY6444444444444444222443534434223653344453544353333122221122222222222111111111211121111111134PDAbFFEHFHGHDEBCED6786G8G23777H4MJMJC9158386931-3GGMTJJE34445EHWPRDABPMMML7747775546B-IKMHMRHNCLP4JGGNNHHKRLMKKFF9JA49CCAC9P82222222221122*IK111111112111--11--1--1--11111127C3436437IDDGIHG5665GFRZBBBB58FLTHLIH-4AD8TID56GNOJA1CEN7EE8L5111111134MBS*QsiLBEmG5*ZUSI2*x*vrwrHbZVjV**Fk511111111-1-1-------7B25D32DB5KINK4SFFD9BBDCC9GEDAEABDCIH---D8DD------B787B86CBBECECEBD-AEDBDDDBABADBACCCCEA9D895638857777888878878BAA6989C4-BABEEDBBCCDC--224444465556DZ6J3331-1-21121-116887849342CHKJKJFLKPIHJLFGHGJ221213312DDGEEEGEFGGJGIIFDFDIDDBBC4444--*2ZZBCLK-----1-12-1-------------------------39353434444k3 ----7A------23834442231444233221233334441443442445443624433343221----2--111------2222222-14143313132422565-71S------------------------------------------------5----1---------1--EC2C111-2H1274172582432 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 496 STR:RPRED 99.4 SQ:SECSTR ###THHHHccHHHcccccccHHHHGGGGGccccHccccGGGGcccHHHHHHHHHHHHHHHHHHHTcccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccTTTccccHHccccccccHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHcGGGHHHHHHHHHTcccccccHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTTTccTcHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccTHHHHHHHHHHHHTcccccEEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccEEEEEEEEccccccGGGTGGGGcTTTTccccccccccHHHHHHHHHHHTTcEEEEEEETETTTEEEEEEEEEccTT DISOP:02AL 498-500| PSIPRED ccHHHHHHHHHHHHHHHcccEEEEEccccEEEEEcHHHHHHHcccHHHHccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEcHHHHHHHcccHHHHccccHHHHHccccHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccEEEEccccccccHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEEEcccc //