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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58907.1
DDBJ      :             homoserine dehydrogenase
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  757/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.58.18d.58.3d.81.1
:436 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   45->287 2ejwA PDBj 9e-33 40.4 %
:RPS:PDB   65->419 3c1nD PDBj 9e-35 10.7 %
:RPS:SCOP  59->184 1t1eA2  d.58.3.2 * 4e-19 10.6 %
:RPS:SCOP  355->420 2qmwA2  d.58.18.3 * 7e-08 19.7 %
:HMM:SCOP  3->141 1k5hA2 c.2.1.3 * 1.1e-38 54.3 %
:HMM:SCOP  137->302 1ebfA2 d.81.1.2 * 2.1e-53 53.0 %
:HMM:SCOP  351->423 1ygyA3 d.58.18.1 * 4.9e-10 23.6 %
:RPS:PFM   27->129 PF03447 * NAD_binding_3 2e-11 38.2 %
:RPS:PFM   137->306 PF00742 * Homoserine_dh 7e-44 53.5 %
:RPS:PFM   356->420 PF01842 * ACT 3e-04 35.5 %
:HMM:PFM   137->315 PF00742 * Homoserine_dh 1.4e-67 49.7 179/179  
:HMM:PFM   10->129 PF03447 * NAD_binding_3 1.8e-24 37.2 113/117  
:HMM:PFM   354->421 PF01842 * ACT 1.9e-13 29.2 65/66  
:BLT:SWISS 1->435 DHOM_PSEAE e-135 63.3 %
:PROS 11->18|PS00318|HMG_COA_REDUCTASE_2
:PROS 183->205|PS01042|HOMOSER_DHGENASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58907.1 GT:GENE ABA58907.1 GT:PRODUCT homoserine dehydrogenase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2800000..2801310) GB:FROM 2800000 GB:TO 2801310 GB:DIRECTION - GB:PRODUCT homoserine dehydrogenase GB:PROTEIN_ID ABA58907.1 GB:DB_XREF GI:76884226 InterPro:IPR001342 InterPro:IPR002202 InterPro:IPR002912 InterPro:IPR005106 LENGTH 436 SQ:AASEQ MEPVKVGLLGLGTVGGGTVNVLSGNAEEITRRAGRGIQVYCAATRDSRKARSCDTEGIWLTTNPHEVVADPQIEIIVELIGGTDLARTLVLKAIAEGKHVVTANKALIALYGNEIFEAAQKAGVMVAFEAAVGGGIPIIKALREGLAGNHIEWLAGIINGTSNFILTEMRDKGCDFAEALVDAQHRGYAEANPTFDIEGIDAAHKLTILASIAFGIPLQFEQVYTEGIGAITREDIDYAGQLGYRIKHLGIARRLAEGVELRVHPTLIPYRRLIANVEGVMNAILVKGDAVGSTLYYGPGAGADPTASAVVADLVDVVRALTSDPENRVPHLAFQPDALVDLPILSMEEVKTAYYLRMRAMDEPGVLAEVTRVFGDQSISIEAILQKEPAAGENHVPIIMLTQPVLERNMNEAIRRIEALESIAGPVTRIRLETLC GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 1->435|DHOM_PSEAE|e-135|63.3|433/434| PROS 11->18|PS00318|HMG_COA_REDUCTASE_2|PDOC00064| PROS 183->205|PS01042|HOMOSER_DHGENASE|PDOC00800| TM:NTM 2 TM:REGION 121->143| TM:REGION 145->167| SEG 6->25|vgllglgtvgggtvnvlsgn| SEG 307->321|asavvadlvdvvral| BL:PDB:NREP 1 BL:PDB:REP 45->287|2ejwA|9e-33|40.4|230/331| RP:PDB:NREP 1 RP:PDB:REP 65->419|3c1nD|9e-35|10.7|346/452| RP:PFM:NREP 3 RP:PFM:REP 27->129|PF03447|2e-11|38.2|102/122|NAD_binding_3| RP:PFM:REP 137->306|PF00742|7e-44|53.5|170/179|Homoserine_dh| RP:PFM:REP 356->420|PF01842|3e-04|35.5|62/65|ACT| HM:PFM:NREP 3 HM:PFM:REP 137->315|PF00742|1.4e-67|49.7|179/179|Homoserine_dh| HM:PFM:REP 10->129|PF03447|1.8e-24|37.2|113/117|NAD_binding_3| HM:PFM:REP 354->421|PF01842|1.9e-13|29.2|65/66|ACT| GO:PFM:NREP 5 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF03447|IPR005106| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF03447|IPR005106| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00742|IPR001342| GO:PFM GO:0008152|"GO:metabolic process"|PF01842|IPR002912| GO:PFM GO:0016597|"GO:amino acid binding"|PF01842|IPR002912| RP:SCP:NREP 2 RP:SCP:REP 59->184|1t1eA2|4e-19|10.6|123/179|d.58.3.2| RP:SCP:REP 355->420|2qmwA2|7e-08|19.7|66/80|d.58.18.3| HM:SCP:REP 3->141|1k5hA2|1.1e-38|54.3|129/152|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 137->302|1ebfA2|2.1e-53|53.0|164/190|d.81.1.2|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| HM:SCP:REP 351->423|1ygyA3|4.9e-10|23.6|72/0|d.58.18.1|1/1|ACT-like| OP:NHOMO 1177 OP:NHOMOORG 931 OP:PATTERN ------1111111111-111111111111111112111111111111111111111111111111-11 1221111111111111111-11111111111111111111111111111111112111111111111121111111111111-111111111-1----1--1-1121-22---------------1111111111122222111-111111111111111111111111111111111111111111111221133333333233333333111133311211--111111411111111111111111111111-111121--22--11-1-111111111111111111111111-11-------------111111111111111222222212112221---122-11211122111111112221--12111111-11-1111111111111111111111111-1111111111111111112212111111211111111111111111111111111-----------------------------11111111111211122211111111111111111111111111112221121211111211111111111111111-1111111111111-111111111211111111111111111111111111111111111121112-111-111111111111111111-1-111111111121222212222222222-2222222222222222222222222222222222222222222222222221-2222222222221-1----------111111-11-1-111-1111222222111111111112122212111111--1-11--121112222222222-22222211111111111111111--------------------------------------1--1-111111 ------1-21--11111111111112111111111111111111111111113111111111111111111111-111111---1111-12111121111-21-----3------------------------------------------------------1---------1-1122I221123221-112212112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 406 STR:RPRED 93.1 SQ:SECSTR #########################HHHTTTTEEEEEEEcccHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEccTTTTTEEcTTcccEEEEcHHHHHHHHHTTTcEEEEETTEEEcTTccEEEccTTHHHHHHHHHHHHHHTcccEEEEEcccccccccTTTccccccEEEHHHHHTTccTTcccccHHHHHHHHHHTccEEEEEcccTccEEEEccccccEEEEEEEEEEEEEEcccccTTccHHHHHHHHHHGGGccccEEEccTTccEEEEEEETTcHHHHHHHHHTTccccccEEEEEEEEEEEEEEcGGGTTcTTHHHHHHHHHHHTTccEEEEEEcHccccTTccEEEEEEEcccHHHHHHHHHHHHHHHTccE#EEEEEc#### PSIPRED ccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccHHHHccccccccEEEccHHHHHccccccEEEEcccccHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHcccEEEEEccHHHcHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccHHHEEEcccccccHHHHHHHHHcccEEEEEEEEEEEcccEEEEEEEEEEcccccccccccccEEEEEEEEEcccEEEEcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHccccEEEEEEccccccHHHHHHHHHHHccccHHHEEEccccccccccEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEEccc //