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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58911.1
DDBJ      :             Ribonuclease III
Swiss-Prot:RNC_NITOC    RecName: Full=Ribonuclease 3;         EC=3.1.26.3;AltName: Full=Ribonuclease III;         Short=RNase III;

Homologs  Archaea  10/68 : Bacteria  889/915 : Eukaryota  120/199 : Viruses  2/175   --->[See Alignment]
a.149.1d.50.1
:233 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->214 1yywC PDBj 2e-29 39.8 %
:RPS:PDB   5->210 3c4bA PDBj 1e-41 29.2 %
:RPS:SCOP  5->139 1o0wA1  a.149.1.1 * 5e-39 40.7 %
:RPS:SCOP  155->214 1qu6A2  d.50.1.1 * 1e-15 19.3 %
:HMM:SCOP  1->160 1o0wA1 a.149.1.1 * 1.2e-48 53.6 %
:HMM:SCOP  108->224 1whnA_ d.50.1.1 * 2.2e-27 50.0 %
:RPS:PFM   37->127 PF00636 * Ribonuclease_3 9e-20 51.6 %
:RPS:PFM   157->214 PF00035 * dsrm 7e-05 41.1 %
:HMM:PFM   37->127 PF00636 * Ribonuclease_3 1.5e-23 46.2 91/105  
:HMM:PFM   157->224 PF00035 * dsrm 1.6e-15 36.4 66/67  
:BLT:SWISS 1->233 RNC_NITOC e-116 100.0 %
:PROS 37->45|PS00517|RNASE_3_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58911.1 GT:GENE ABA58911.1 GT:PRODUCT Ribonuclease III GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2804551..2805252) GB:FROM 2804551 GB:TO 2805252 GB:DIRECTION - GB:PRODUCT Ribonuclease III GB:PROTEIN_ID ABA58911.1 GB:DB_XREF GI:76884230 InterPro:IPR000999 InterPro:IPR001159 InterPro:IPR011907 LENGTH 233 SQ:AASEQ MTDGLERLCRKLGYRFAEPALLRHAITHRSATKENNERLEFLGDSILNFLIADFLYSGFPRAQEGELSRLRATLVKGETLAELARELEIGDHLILGLGELKSGGYRRTSILADAFEAVIGAVYLDGGLEACRKLVSSLYRDRLETLTNEALLNLKDPKTRLQEYLQARQFPLPDYRVSAVSGEAHDQVFQVECTLNNTFPSVIGIGRSRRKAEQDAATRALALLLAENEDMNV GT:EXON 1|1-233:0| SW:ID RNC_NITOC SW:DE RecName: Full=Ribonuclease 3; EC=3.1.26.3;AltName: Full=Ribonuclease III; Short=RNase III; SW:GN Name=rnc; OrderedLocusNames=Noc_2458; SW:KW Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Nuclease;RNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->233|RNC_NITOC|e-116|100.0|233/233| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 37->45|PS00517|RNASE_3_1|PDOC00448| SEG 143->154|letltneallnl| SEG 216->226|aatralallla| BL:PDB:NREP 1 BL:PDB:REP 5->214|1yywC|2e-29|39.8|201/218| RP:PDB:NREP 1 RP:PDB:REP 5->210|3c4bA|1e-41|29.2|192/238| RP:PFM:NREP 2 RP:PFM:REP 37->127|PF00636|9e-20|51.6|91/93|Ribonuclease_3| RP:PFM:REP 157->214|PF00035|7e-05|41.1|56/66|dsrm| HM:PFM:NREP 2 HM:PFM:REP 37->127|PF00636|1.5e-23|46.2|91/105|Ribonuclease_3| HM:PFM:REP 157->224|PF00035|1.6e-15|36.4|66/67|dsrm| GO:PFM:NREP 5 GO:PFM GO:0003723|"GO:RNA binding"|PF00636|IPR000999| GO:PFM GO:0004525|"GO:ribonuclease III activity"|PF00636|IPR000999| GO:PFM GO:0006396|"GO:RNA processing"|PF00636|IPR000999| GO:PFM GO:0003725|"GO:double-stranded RNA binding"|PF00035|IPR001159| GO:PFM GO:0005622|"GO:intracellular"|PF00035|IPR001159| RP:SCP:NREP 2 RP:SCP:REP 5->139|1o0wA1|5e-39|40.7|135/169|a.149.1.1| RP:SCP:REP 155->214|1qu6A2|1e-15|19.3|57/89|d.50.1.1| HM:SCP:REP 1->160|1o0wA1|1.2e-48|53.6|153/169|a.149.1.1|1/1|RNase III domain-like| HM:SCP:REP 108->224|1whnA_|2.2e-27|50.0|92/0|d.50.1.1|1/1|dsRNA-binding domain-like| OP:NHOMO 1111 OP:NHOMOORG 1021 OP:PATTERN --------------------------------1-----111111-121-------------------- 111-111111111111111-1111111111111111111111111111111111111111111111-111111111111111111111111111111--11111111111111111111111111111111111111111111111112-33211--11111122-12222111111111111-----11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11--1111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111--111111111111111-111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111-111111111111111111111 ----311-------11---111-----11----1-1-------111-12------1-------11111-1221-1----11111-121--21-211-------213---121-1212111111-231414C2-31511111111-1111121131111113221121111323311-------111443-54--11221 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 215 STR:RPRED 92.3 SQ:SECSTR HHTTHHHHHHHHTcccccHHHHHHHHccTTcTTcccHHHHHHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHccHHHHHHHHHHTTGGGTcccccHHHHHcccccccHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcTTTEEEcccEEcEEEEEEcccTTccEEEEEEETTTEEEEEEEEccHHHHHHH################## DISOP:02AL 1-4, 99-105, 229-233| PSIPRED cHHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHHHcccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEEEEccEEEEEEEEEccHHHHHHHHHHHHHHHHccccccccc //