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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58960.1
DDBJ      :             Stage V sporulation-like protein, SpoVR
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  309/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.110.9
:478 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->162 3fegA PDBj 8e-04 28.2 %
:RPS:PDB   248->324 2covI PDBj 7e-20 21.1 %
:RPS:SCOP  18->89 2a2lA1  d.110.9.1 * 6e-04 15.4 %
:RPS:PFM   6->412 PF04293 * SpoVR 6e-84 43.0 %
:HMM:PFM   3->416 PF04293 * SpoVR 9e-148 42.7 412/427  
:BLT:SWISS 15->474 SP5R_BACSU 5e-84 37.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58960.1 GT:GENE ABA58960.1 GT:PRODUCT Stage V sporulation-like protein, SpoVR GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2853935..2855371) GB:FROM 2853935 GB:TO 2855371 GB:DIRECTION - GB:PRODUCT Stage V sporulation-like protein, SpoVR GB:PROTEIN_ID ABA58960.1 GB:DB_XREF GI:76884279 InterPro:IPR007390 LENGTH 478 SQ:AASEQ MASHWTIEDLKYWDDKIREKAEEFGLSCFPQEFEICDHTQMLGYMAYSGMPAHYPHWSYGKAYEKLQTLYEHGMSGLPYEMVINSNPALAYLVQENSLCLQILTIAHVYGHNDFFKNNFTFRDTQPELTLSNFKLRADRVRGYIEDPSIGLHKTERVLDAAHALSLQCSRNQAIRKLSASEQKEQVVAAAHPTHDPYQRLHKQPEYVEPDLNRFPLFPEEDILLFMRDNNLYLADWERDLLTIVHEQARYFIPQIETKIMNEGWASYWHHKLMNSIDLPQDLYLEFLVHHNQVVRPHPGDINPYYLGFKLWHDIFRHCQVSAEEEHVGKPRKGGREGIFQVREVDRDASFLRRFLTEELMREMDMFEYQPKGEALVISKVSDEEHWREIKTTLLKNVGMGSIPVIRIEDADYGRNRQLYLKHDHDGRDLQAEYAEKTLSHLYQLWGRDVWLETRMNDRKVCMGYGEDGFVQKTLGRFR GT:EXON 1|1-478:0| BL:SWS:NREP 1 BL:SWS:REP 15->474|SP5R_BACSU|5e-84|37.4|449/468| BL:PDB:NREP 1 BL:PDB:REP 55->162|3fegA|8e-04|28.2|103/336| RP:PDB:NREP 1 RP:PDB:REP 248->324|2covI|7e-20|21.1|71/88| RP:PFM:NREP 1 RP:PFM:REP 6->412|PF04293|6e-84|43.0|402/418|SpoVR| HM:PFM:NREP 1 HM:PFM:REP 3->416|PF04293|9e-148|42.7|412/427|SpoVR| RP:SCP:NREP 1 RP:SCP:REP 18->89|2a2lA1|6e-04|15.4|65/142|d.110.9.1| OP:NHOMO 325 OP:NHOMOORG 318 OP:PATTERN ------------------------11111111------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------11111---11----------------------------------------11---11111111131111411111111111112111--------11---------------------------------------------------------------------------------------------11-------1-11-11-111-11--2--1111111---11---------------------1111-------------------1111111111--1---11111111--1----------1----------11-111------------------------------------111111111111-11111111111111111111--11-11---11111---11---11----------11-111------------111-111-1111111---------------------------111111111-1111111111111111111111---1111------11111111111111111-111111111111111111111111---1111111111-11111111111111-111111111111---------1111--11--------------------------1111111111111111111----------11111111111111------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 188 STR:RPRED 39.3 SQ:SECSTR ######################################################ccHHHHHHHHHHHHHHHccccccc#cccHHHHTTHHHHHHHHHHHHHTccccEEEEcccccGGGEEEEcccccEEEcccTTcEEEEHHH####HHHHHHHHTTEETTc#####################################################################################EEEETTEEEEEEEccccccccEEEEETTEEEEcEETTEEEEEEEccT######TcEEEEEEEEETTTEEEEEEEEEE#########TTEEEEEEEEEEcc################################################################################################################################### DISOP:02AL 175-190, 199-217| PSIPRED ccccccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccccccccccccHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHccccHHHHccccccccHHHHHHHHHHHccHHHHHHcccHHHHHHHccEEEEEcccEEEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEcEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEEcccccHHHHHcccc //