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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58976.1
DDBJ      :             NlpB/DapX lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  92/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:338 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   49->229 3d9bA PDBj 2e-04 17.1 %
:RPS:PFM   97->332 PF06804 * Lipoprotein_18 4e-22 36.3 %
:HMM:PFM   94->331 PF06804 * Lipoprotein_18 5.3e-11 24.1 224/303  
:BLT:SWISS 41->336 Y928_NEIMB 2e-16 30.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58976.1 GT:GENE ABA58976.1 GT:PRODUCT NlpB/DapX lipoprotein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2872182..2873198) GB:FROM 2872182 GB:TO 2873198 GB:DIRECTION - GB:PRODUCT NlpB/DapX lipoprotein GB:PROTEIN_ID ABA58976.1 GB:DB_XREF GI:76884295 InterPro:IPR010653 LENGTH 338 SQ:AASEQ MGIRIGRCYAILWVIPVVLGGCSIFSALDELVPDNTKEYRKAQTLPPLDIPPDLSAEAIRTNIIEDDAGTATYLEYQEQGRNPLMDLYEIESDRKPRLEGEGVEQRLLVPEDQKKVWERVHSFWAENGLEIKAEDIRIGFMDTTGSSEQDNYRVRIERGETPQSTIIHLKQNTADPNPQQAETMLRRLAEYLGALHAQDLARVEQNGQQATTSPSRINMLDGGTAMELAEDFSRAWRQVGLVLDQKGFSVEDRNRSRGVYYIRYKDPFAQPQETDSGWFSKLAFWDDEEDEDEQSRYQIKLISDGAATRVVILDTEGRRDESATAKRLLSLLGEQLTE GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 41->336|Y928_NEIMB|2e-16|30.2|288/100| TM:NTM 1 TM:REGION 9->31| RP:PDB:NREP 1 RP:PDB:REP 49->229|3d9bA|2e-04|17.1|158/1045| RP:PFM:NREP 1 RP:PFM:REP 97->332|PF06804|4e-22|36.3|223/303|Lipoprotein_18| HM:PFM:NREP 1 HM:PFM:REP 94->331|PF06804|5.3e-11|24.1|224/303|Lipoprotein_18| OP:NHOMO 118 OP:NHOMOORG 93 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111112222222222222222222222221111111111111111111111112111-1111111111111-------------------------------------------------------------------------------------------111-1-------------------------------------------------------------------------------------------------------------------------------------111111111111111111------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 158 STR:RPRED 46.7 SQ:SECSTR ################################################TTGGGccHHHHHHccEEEEccccccEEEEEEEccccccHHHHHHHTHHHHHHTTcccEEEcccEEEEEEHHH######HHTTccHHHHHccEETcccccTTccccEEc#ccccccccHHHHHTcEEEEcTTccEEEGG############GGEEEEEEEc####ccccEEEETTEEEEEEE############################################################################################################# DISOP:02AL 1-5, 30-41, 78-89, 175-179, 199-224, 287-288, 337-338| PSIPRED cccccHHHHHHHHHHHHHHHHcccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccEEEEEccEEEEEEcccHHHHHHHHHHHHHHcccEEEEEcccccEEEEcccccccEEEEEEEEcccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccEEEEcccHHHHHHHHHHHHHHcccEEEEcccccEEEEEEEEccHHHcccccccHHHHHcccccccccccccEEEEEEEEcccEEEEEEEccccccccHHHHHHHHHHHHHHHcc //