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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58977.1
DDBJ      :             dihydrodipicolinate synthase
Swiss-Prot:DAPA_NITOC   RecName: Full=Dihydrodipicolinate synthase;         Short=DHDPS;         EC=4.2.1.52;

Homologs  Archaea  61/68 : Bacteria  859/915 : Eukaryota  132/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:292 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->291 1yxcA PDBj 1e-83 52.9 %
:RPS:PDB   1->291 3cprA PDBj 7e-81 33.3 %
:RPS:SCOP  2->286 1f5zA  c.1.10.1 * 9e-83 20.8 %
:HMM:SCOP  1->290 1xkyA1 c.1.10.1 * 9.5e-104 51.7 %
:RPS:PFM   4->285 PF00701 * DHDPS 7e-64 49.3 %
:HMM:PFM   1->287 PF00701 * DHDPS 6.1e-107 49.5 287/289  
:BLT:SWISS 1->292 DAPA_NITOC e-158 100.0 %
:PROS 38->55|PS00665|DHDPS_1
:PROS 133->163|PS00666|DHDPS_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58977.1 GT:GENE ABA58977.1 GT:PRODUCT dihydrodipicolinate synthase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2873217..2874095) GB:FROM 2873217 GB:TO 2874095 GB:DIRECTION - GB:PRODUCT dihydrodipicolinate synthase GB:PROTEIN_ID ABA58977.1 GB:DB_XREF GI:76884296 InterPro:IPR002220 InterPro:IPR005263 LENGTH 292 SQ:AASEQ MFHGSMVALVTPMHPDGALDWEGLRRLVDFHIENGTDAIVTVGTTGESPTLEVKEHIRVIREVVDQAQGRLPVIAGTGANSTREAEELTRAALEAGADACLLVVPYYNRPTQEGLYLHFKAIAEAVPIPQILYNVPTRTACDLLPETVARLADISNIVGIKEATEDIARGRQILELCGDKLDLYSGEDSAAMEYMLIGGRGTISVTANVAPKAVHEMCTVALQGNRKAAEAINTRLCPLYAALFSEVNPIPVKWALYEMGLIAQGIRLPLTVLSERYHELLRQALRQEQILQ GT:EXON 1|1-292:0| SW:ID DAPA_NITOC SW:DE RecName: Full=Dihydrodipicolinate synthase; Short=DHDPS; EC=4.2.1.52; SW:GN Name=dapA; OrderedLocusNames=Noc_2524; SW:KW Amino-acid biosynthesis; Complete proteome; Cytoplasm;Diaminopimelate biosynthesis; Lyase; Lysine biosynthesis; Schiff base. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->292|DAPA_NITOC|e-158|100.0|292/292| GO:SWS:NREP 5 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0019877|"GO:diaminopimelate biosynthetic process"|Diaminopimelate biosynthesis| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0009085|"GO:lysine biosynthetic process"|Lysine biosynthesis| PROS 38->55|PS00665|DHDPS_1|PDOC00569| PROS 133->163|PS00666|DHDPS_2|PDOC00569| SEG 82->95|treaeeltraalea| BL:PDB:NREP 1 BL:PDB:REP 1->291|1yxcA|1e-83|52.9|291/292| RP:PDB:NREP 1 RP:PDB:REP 1->291|3cprA|7e-81|33.3|288/301| RP:PFM:NREP 1 RP:PFM:REP 4->285|PF00701|7e-64|49.3|282/288|DHDPS| HM:PFM:NREP 1 HM:PFM:REP 1->287|PF00701|6.1e-107|49.5|287/289|DHDPS| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00701|IPR002220| GO:PFM GO:0016829|"GO:lyase activity"|PF00701|IPR002220| RP:SCP:NREP 1 RP:SCP:REP 2->286|1f5zA|9e-83|20.8|284/293|c.1.10.1| HM:SCP:REP 1->290|1xkyA1|9.5e-104|51.7|290/0|c.1.10.1|1/1|Aldolase| OP:NHOMO 2087 OP:NHOMOORG 1052 OP:PATTERN 111---214444444221111111211222211111111111111111111111111-1121112--- 3251423133312122211-13112211111233333485111114212321252214--1122215666211114113221211111232211111111111122132511111111111111111111111111111111111111111111111111111111111111111111111113--121112122222222222222227244322221332411111111241222222222222222112111--11-1-1-3311121211111111111111211322333332331111111111111211111111212124111111121235111222111--113112211111122211211121511111111121B661235443233333333333-21521B155611A6658B4AAA77542121344133125111111112121121311-111111111111111111111111111121114542559958563332446744443562722441256421422526267121121221111111111111111111111211111211111111111113111111212211211111111111111111222211211312111111211112111122--1111111111142623314224443422-22422432222542232231334323232323233333232233222222211111111111111111111111121111325222223222222222553542212121443534352455213221----1---112211111112111112323322211111112111111----------1--------1--------1---1---1111112111112 ---------------1243332355442211111111------222224498A7564221-1--1-------311--------------1212-1-11211--311--2-211111411-111-2213-562-223211-2-121-111-2--2112232221311---11--111111J1111132143311241122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 100.0 SQ:SECSTR HHccEEEEccccccTTccccHHHHHHHHHHHHHTTccEEEEccTTTTTTTccHHHHHHHHHHHHHHHTTTcEEEEEcccccHHHHHHHHHHHHHTTccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcHHHHcccccHHHHHHHTTcTTEEEEEEccccHHHHHHHHHHHcGGcEEEEccGGGHHHHHHTTccEEEEcGGGTcHHHHHHHHHHHHHTcHHHHHHHHHHTHHHHHHHHHHcHHHHHHHHHHHTTcccccccTTcccccHHHHHHHHHHHHHTTccc PSIPRED ccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHccccEEEEEcccccHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccc //