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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59022.1
DDBJ      :             membrane protease FtsH catalytic subunit
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  198/199 : Viruses  2/175   --->[See Alignment]
a.269.1c.37.1
:641 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   152->598 2ce7C PDBj e-122 53.5 %
:RPS:PDB   144->606 2dhrA PDBj e-115 53.6 %
:RPS:SCOP  153->406 1oz4A2  c.37.1.20 * 1e-44 43.4 %
:RPS:SCOP  406->598 2ce7A1  a.269.1.1 * 5e-54 43.2 %
:HMM:SCOP  145->397 2ce7A2 c.37.1.20 * 1.5e-78 41.9 %
:HMM:SCOP  406->606 2di4A1 a.269.1.1 * 1e-72 52.3 %
:RPS:PFM   8->85 PF06480 * FtsH_ext 4e-13 46.2 %
:RPS:PFM   156->211 PF01078 * Mg_chelatase 1e-04 47.6 %
:RPS:PFM   192->319 PF00004 * AAA 3e-33 60.2 %
:RPS:PFM   388->596 PF01434 * Peptidase_M41 2e-61 53.7 %
:HMM:PFM   386->596 PF01434 * Peptidase_M41 6e-84 53.1 211/213  
:HMM:PFM   192->324 PF00004 * AAA 9.6e-49 53.9 128/130  
:HMM:PFM   8->94 PF06480 * FtsH_ext 6e-17 36.5 85/110  
:BLT:SWISS 4->630 FTSH_SALTY 0.0 72.0 %
:PROS 295->313|PS00674|AAA
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59022.1 GT:GENE ABA59022.1 GT:PRODUCT membrane protease FtsH catalytic subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2920559..2922484) GB:FROM 2920559 GB:TO 2922484 GB:DIRECTION - GB:PRODUCT membrane protease FtsH catalytic subunit GB:PROTEIN_ID ABA59022.1 GB:DB_XREF GI:76884341 InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546 LENGTH 641 SQ:AASEQ MSDMAKNIILWVVIALVLMSVFNSFDTRQVSGHHIDYSRFIADVKSGQVNKVVIDGRHISGETSEGKHFTTYSPGNDPGLIGDLLGNGVVIEAKPEEGTGLLMQVFISWFPMLLLIAVWIFFMRQMQGGAGGRGAMSFGKSRARMLSEEQVKVTFSDVAGCDEAKEEVQELVEFLREPGRFQKLGGKIPRGVLMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVSLPDIRGRAQILKVHLRKVPVAEDVEPALIARGTPGFSGADLANLVNEAALFAARGSKRLVDMQDLEQAKDKILMGVERRSAVMSEDDKRLTAYHEAGHAIIGRLVPSHDPVYKVSIIPRGRALGVTMFLPEEDRYSLSKLQIESQISSLFGGRLAEELIFGVEYVTTGASNDIQRATELARNMVTKWGLSEKLGPLAYGEEEGEVFLGHSVTQHKGIADTTASEIDTEIRAIIDRNYLRAKQLLEENMDKLHVMSDALMKYETIDKEQIDDIMAGKEPRPPKVSGSDVEPPSGSDAVPPKGKEEQPVGGGSIPASQH GT:EXON 1|1-641:0| BL:SWS:NREP 1 BL:SWS:REP 4->630|FTSH_SALTY|0.0|72.0|622/644| PROS 295->313|PS00674|AAA|PDOC00572| TM:NTM 2 TM:REGION 5->27| TM:REGION 102->124| SEG 121->135|ffmrqmqggaggrga| SEG 261->271|grqrgaglggg| BL:PDB:NREP 1 BL:PDB:REP 152->598|2ce7C|e-122|53.5|409/421| RP:PDB:NREP 1 RP:PDB:REP 144->606|2dhrA|e-115|53.6|457/458| RP:PFM:NREP 4 RP:PFM:REP 8->85|PF06480|4e-13|46.2|78/99|FtsH_ext| RP:PFM:REP 156->211|PF01078|1e-04|47.6|42/200|Mg_chelatase| RP:PFM:REP 192->319|PF00004|3e-33|60.2|118/123|AAA| RP:PFM:REP 388->596|PF01434|2e-61|53.7|203/206|Peptidase_M41| HM:PFM:NREP 3 HM:PFM:REP 386->596|PF01434|6e-84|53.1|211/213|Peptidase_M41| HM:PFM:REP 192->324|PF00004|9.6e-49|53.9|128/130|AAA| HM:PFM:REP 8->94|PF06480|6e-17|36.5|85/110|FtsH_ext| GO:PFM:NREP 11 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF06480|IPR011546| GO:PFM GO:0005524|"GO:ATP binding"|PF06480|IPR011546| GO:PFM GO:0008270|"GO:zinc ion binding"|PF06480|IPR011546| GO:PFM GO:0016021|"GO:integral to membrane"|PF06480|IPR011546| GO:PFM GO:0015979|"GO:photosynthesis"|PF01078|IPR000523| GO:PFM GO:0015995|"GO:chlorophyll biosynthetic process"|PF01078|IPR000523| GO:PFM GO:0016851|"GO:magnesium chelatase activity"|PF01078|IPR000523| GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01434|IPR000642| GO:PFM GO:0005524|"GO:ATP binding"|PF01434|IPR000642| GO:PFM GO:0006508|"GO:proteolysis"|PF01434|IPR000642| RP:SCP:NREP 2 RP:SCP:REP 153->406|1oz4A2|1e-44|43.4|251/270|c.37.1.20| RP:SCP:REP 406->598|2ce7A1|5e-54|43.2|162/162|a.269.1.1| HM:SCP:REP 145->397|2ce7A2|1.5e-78|41.9|253/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 406->606|2di4A1|1e-72|52.3|199/0|a.269.1.1|1/1|FtsH protease domain-like| OP:NHOMO 8101 OP:NHOMOORG 1175 OP:PATTERN 44454466666666672222222588A88666343333333335555586787343454331222244 1233422222222245233-332244333334455533544544422131114342321134213343422222232211213111111112121111-11411121131111111111111111322332234332222221223D6BA778656655555566699ACA5555555555553342211121111111111111111121221211111121111111113411111111111111111111111111111112111111111111111111112111111111111111111111111111111111111124435454444425233334222333125335353333222253331111215211411111312553232231411111111112-57324233311122222344422112112112131111122222222311113111111111111111111111111111312512222112111322423222224436222212245142111531232212454131332211111111111222211232112321212111333234336445555362323233333222222222224334111111333111222332313232142221231-161121111111111111111-111121-11111211121111111111111124111111211211111111111111111111111111111111211111111132422111111122-2112112111112112222321122211214121112111111111211111111111221121111211111121222222111111112218CO91-11111111111111111111131111111331 HIDERPN8*UYIQQTNMLJIJJJKJJJLLaKKJJJKKIHIJJIIJIKIKKLLOLGLNLJJJKKKKLKLDKMKKKKKLAKMLKJKKKLL-PeLMNLJIIIJHGGRVWBQxUlfibhelPOPMQSPfeKsKz*Z1aWsMMKJWLRWMLQMOJSNLaMcSUVPhaSRRYPcPRvTZSONWcY*WVVZY*q**L*xYaWWTVi -----------------------------------------------------------------------------------------------1--------------------------------------------------------------------------1---- DISOP:02AL 1-3, 28-32, 123-149, 262-277, 398-410, 528-534, 602-641| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccEEEEEEEccEEEEEEEcccEEEEEEccccHHHHHHHHHcccEEEEEEccccccEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccHHHHccccccccccHHHHccHHHHHHHHHHHHHHHcccHHHHHccccccccEEEEccccccHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHcccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHcccccHHHHEEHHHHHHHHHHHHHHccccccEEEEEEEEEccccccEEEcccccHHHccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc //