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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59025.1
DDBJ      :             carbamoyl-phosphate synthase large subunit
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  837/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
a.92.1c.24.1c.30.1c.98.2d.142.1
:1073 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->1072 1bxrA PDBj 0.0 70.1 %
:RPS:PDB   1->1070 1bxrA PDBj 0.0 69.8 %
:RPS:SCOP  1->127 1a9xA3  c.30.1.1 * 2e-21 81.1 %
:RPS:SCOP  128->402 1a9xA5  d.142.1.2 * 3e-80 80.7 %
:RPS:SCOP  403->555 1a9xA1  a.92.1.1 * 4e-48 50.3 %
:RPS:SCOP  588->677 2iojA1  c.98.2.2 * 2e-18 18.0 %
:RPS:SCOP  676->934 1a9xA6  d.142.1.2 * 2e-63 65.2 %
:RPS:SCOP  931->1066 1b93A  c.24.1.2 * 2e-32 16.2 %
:HMM:SCOP  4->130 1a9xA4 c.30.1.1 * 1e-50 57.9 %
:HMM:SCOP  128->402 1a9xA5 d.142.1.2 * 1.1e-114 54.9 %
:HMM:SCOP  396->555 1a9xA1 a.92.1.1 * 7.7e-60 49.7 %
:HMM:SCOP  555->675 1a9xA4 c.30.1.1 * 5.1e-55 63.6 %
:HMM:SCOP  673->934 1a9xA5 d.142.1.2 * 3.2e-109 58.4 %
:HMM:SCOP  935->1072 1a9xA2 c.24.1.1 * 5e-41 42.8 %
:RPS:PFM   6->123 PF00289 * CPSase_L_chain 1e-17 40.7 %
:RPS:PFM   128->333 PF02786 * CPSase_L_D2 2e-38 42.6 %
:RPS:PFM   424->547 PF02787 * CPSase_L_D3 3e-33 51.2 %
:RPS:PFM   560->668 PF00289 * CPSase_L_chain 3e-22 56.8 %
:RPS:PFM   673->873 PF02786 * CPSase_L_D2 6e-35 40.3 %
:RPS:PFM   956->1032 PF02142 * MGS 7e-09 40.3 %
:HMM:PFM   128->334 PF02786 * CPSase_L_D2 4.3e-76 42.2 204/211  
:HMM:PFM   673->874 PF02786 * CPSase_L_D2 2.2e-39 29.5 200/211  
:HMM:PFM   6->123 PF00289 * CPSase_L_chain 8.8e-23 31.4 102/110  
:HMM:PFM   559->668 PF00289 * CPSase_L_chain 7.4e-24 41.7 96/110  
:HMM:PFM   426->547 PF02787 * CPSase_L_D3 6.5e-44 50.4 119/121  
:HMM:PFM   956->1041 PF02142 * MGS 1.3e-22 43.0 86/95  
:BLT:SWISS 1->1067 CARB_PSESM 0.0 72.9 %
:PROS 164->178|PS00866|CPSASE_1
:PROS 709->723|PS00866|CPSASE_1
:PROS 297->304|PS00867|CPSASE_2
:PROS 838->845|PS00867|CPSASE_2
:REPEAT 2|8->399|559->931

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59025.1 GT:GENE ABA59025.1 GT:PRODUCT carbamoyl-phosphate synthase large subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2923737..2926958) GB:FROM 2923737 GB:TO 2926958 GB:DIRECTION - GB:PRODUCT carbamoyl-phosphate synthase large subunit GB:PROTEIN_ID ABA59025.1 GB:DB_XREF GI:76884344 InterPro:IPR002695 InterPro:IPR005479 InterPro:IPR005480 InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006275 InterPro:IPR011607 LENGTH 1073 SQ:AASEQ MPKRNDINSIVILGAGPIVIGQACEFDYSGAQACKSLKEEGYRVILVNSNPATIMTDPELADATYIEPITWKTVAKIIEKERPDALLPTMGGQTALNCALDLAREGILERYDVEMIGANQEAINKAEDRDLFRQAMQKIGLDMPRSAIAHSLEEAQQAQRDLGFPIVIRPSFTLGGSGGGIAYNREEFVEICERGLDLSPNSELLIDESVLGWKEFEMEVVRDSKDNCIIICTIENLDPMGVHTGDSITVAPAQTLTDKEYQVMRDAALAVLREIGVDTGGSNVQFAVDPENGRLIIIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGLTPASFEPSIDYVVTKIPRFTFEKFPRADARLTTQMKSVGEVMAIGRNFQESLQKALRSLETGTDGFNEKVDLAAEDVVETLRYQLRVPSADRIYYLADAFRAGFSMAEIYDLSHIDPWFLTQIQDLVEVEQGLRGTSLEQVEKDRLYRLKRQGFSDRRLAVLLGAGEEEVRRRRHTLGIRPVYKRVDTCGAEFATTTAYLYSTYDEECEAVPSQRNKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIISLEQPQGVIVQYGGQTPLKLARALEAAGAPIIGTSPDSIDLAEDRERFQWLIEKLGLKQPPNRTARTQEEAIRLAAEIGYPLVVRPSYVLGGRAMEIVYNADELARYMKEAVSVSNDSPVLLDRFLDEATEVDVDAICDGEQVMVGGIMEHIEQAGVHSGDSACALPPFSLSAAVQNRLREQVYNMARELKVVGLMNTQFAIQANEIYILEVNPRASRTVPFVSKTIGIPLAKVAARCMMGQSLAKQGMIEEIIPHYFAVKEAVFPFIKFSGVDPILGPEMKSTGEVMGTGRCFGEAFYKALLGAGVVLPQKGKVFISVRDADKQRIVPVAQELSRLGFELLATRGTSTVLDQEGVACIQINKVLEGQPHIVDMIKNDEIALIINTTEGRKAVSDSYTIRRSALQHKVTYTTTVAGAWATCEALRAETTDSVYRLQDLQREARK GT:EXON 1|1-1073:0| BL:SWS:NREP 1 BL:SWS:REP 1->1067|CARB_PSESM|0.0|72.9|1067/1073| PROS 164->178|PS00866|CPSASE_1|PDOC00676| PROS 709->723|PS00866|CPSASE_1|PDOC00676| PROS 297->304|PS00867|CPSASE_2|PDOC00676| PROS 838->845|PS00867|CPSASE_2|PDOC00676| NREPEAT 1 REPEAT 2|8->399|559->931| BL:PDB:NREP 1 BL:PDB:REP 1->1072|1bxrA|0.0|70.1|1072/1073| RP:PDB:NREP 1 RP:PDB:REP 1->1070|1bxrA|0.0|69.8|1070/1073| RP:PFM:NREP 6 RP:PFM:REP 6->123|PF00289|1e-17|40.7|102/102|CPSase_L_chain| RP:PFM:REP 128->333|PF02786|2e-38|42.6|202/207|CPSase_L_D2| RP:PFM:REP 424->547|PF02787|3e-33|51.2|123/123|CPSase_L_D3| RP:PFM:REP 560->668|PF00289|3e-22|56.8|95/102|CPSase_L_chain| RP:PFM:REP 673->873|PF02786|6e-35|40.3|199/207|CPSase_L_D2| RP:PFM:REP 956->1032|PF02142|7e-09|40.3|77/95|MGS| HM:PFM:NREP 6 HM:PFM:REP 128->334|PF02786|4.3e-76|42.2|204/211|CPSase_L_D2| HM:PFM:REP 673->874|PF02786|2.2e-39|29.5|200/211|CPSase_L_D2| HM:PFM:REP 6->123|PF00289|8.8e-23|31.4|102/110|CPSase_L_chain| HM:PFM:REP 559->668|PF00289|7.4e-24|41.7|96/110|CPSase_L_chain| HM:PFM:REP 426->547|PF02787|6.5e-44|50.4|119/121|CPSase_L_D3| HM:PFM:REP 956->1041|PF02142|1.3e-22|43.0|86/95|MGS| GO:PFM:NREP 12 GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| GO:PFM GO:0004086|"GO:carbamoyl-phosphate synthase activity"|PF02787|IPR005480| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF02787|IPR005480| GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| RP:SCP:NREP 6 RP:SCP:REP 1->127|1a9xA3|2e-21|81.1|127/127|c.30.1.1| RP:SCP:REP 128->402|1a9xA5|3e-80|80.7|275/275|d.142.1.2| RP:SCP:REP 403->555|1a9xA1|4e-48|50.3|153/153|a.92.1.1| RP:SCP:REP 588->677|2iojA1|2e-18|18.0|89/120|c.98.2.2| RP:SCP:REP 676->934|1a9xA6|2e-63|65.2|244/244|d.142.1.2| RP:SCP:REP 931->1066|1b93A|2e-32|16.2|136/148|c.24.1.2| HM:SCP:REP 4->130|1a9xA4|1e-50|57.9|121/0|c.30.1.1|1/2|PreATP-grasp domain| HM:SCP:REP 128->402|1a9xA5|1.1e-114|54.9|275/0|d.142.1.2|1/2|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 396->555|1a9xA1|7.7e-60|49.7|153/153|a.92.1.1|1/1|Carbamoyl phosphate synthetase, large subunit connection domain| HM:SCP:REP 555->675|1a9xA4|5.1e-55|63.6|121/0|c.30.1.1|2/2|PreATP-grasp domain| HM:SCP:REP 673->934|1a9xA5|3.2e-109|58.4|262/0|d.142.1.2|2/2|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 935->1072|1a9xA2|5e-41|42.8|138/0|c.24.1.1|1/1|Methylglyoxal synthase-like| OP:NHOMO 2116 OP:NHOMOORG 1084 OP:PATTERN --11-21111111111-1111112111111112233342222211211121222-1-----111--21 2121112111123222222-23113122222321213477132212112222323223111111251121211111111-2215334433351211-1111111121212---------------22222222222111222221122122221122221222222122112122222122121112222125422222222322222243553322254514332222222122222222222222232223121111232224322221132212333331111111111111111111111111111111111222111122-12---112-11134222222212--2212233243311211112-12121211222222425443423533433333333334-33333232432224422445344332413332333332222222222111113131112222222--11--1111111111112122122133232111121111111111111112122121221213121222332111122212112111111113212312111211111111211211113313112222111111112211111111131111111223111221211111112111111211311-211211111111311111111111111-111111111111111111111111322111111111111111111111111111111111111111121111113222123121111-12----1--111111121121243344344333333544222222222211111111111111111111111111111121222222--------1-1---------------------------1--11111132 12--124-521-22532342332323222223222222223222223422223232332222232222223232222-3222222232-23223242222222445-323B4532443322232532619T3-5332222313311221242232433449A33321211A32933111U1111151462322364333 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1072 STR:RPRED 99.9 SQ:SECSTR ccccccccEEEEEccccccTTccTHHHHHHHHHHHHHHTTccEEEEEcccTTccTTcTTTccEEEcccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHTTHHHHHTcEEccccHHHHHHHHcHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHcccEEEEETTccTTTTcEEEccHHHHHHHHHHHHHHcccccEEEEcccTTcEEEEEEEEEcTTccEEEEEEEEEcccTTccTTcccEEEccccccHHHHHHHHHHHHHHHHHHTcccEEEEEEEEEETTTTEEEEEEEEccccHHHHHHHHHHTccHHHHHHHHHTTccTTTcccGGGTTccccccccccccEEEEEEEccGGGcTTccccccccccccEEEEEEEccHHHHHHHHHHHcccccccccccccTTcTTHHHHHHHHHHcccTTHHHHHHHHHHHTccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHHHHTcccEEEEccccTTcccccccEEEEEccccccccccccccEEEEccccccTTccHHHHHHHHHHHHHHHHTTcEEEEEEccTTccTTcTTTccEEEEccccHHHHHHHHHHHcccEEEccccTHHHHHHHHHHHHTTccEEcccHHHHHHHHcHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHcccEEEEcccccTTTTcEEEccHHHHHHHHHHHHHHcTTccEEEEEccTTcEEEEEEEEEccccEEEEEEEEEcccTTccGGGccEEEccccccHHHHHHHHHHHHHHHHHHTccEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHTccHHHHHHHHHTTccHHHHTcccccccccEEEEEEEccGGGcTTccccccccccccEEEEEEEccHHHHHHHHHHHTTcccccccEEEEEccGGGGTHHHHHHHHHHHTTcEEEEcHHHHHHHHHHTcccEEcccTTTccccHHHHHHTTcccEEEEccccHHHHHHTHHHHHHHHHTTcEEEccHHHHHHHHHHTTccTTTccccHHHHHHTcc# DISOP:02AL 1-4, 1064-1066, 1069-1073| PSIPRED ccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHcccHHHccEEEEEcccHHHHHHHHHHHcccEEEEccccccHHHHcHHHHHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEEEcccccccccEEEccHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEcccccEEEEccccccccccEEcccEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccEEEEEEcccccccHHHHHHHHcccHHHHHHHHHccccccccccccccccccEEEEcccccEEccccccccccccccccEEcccEEEEEEEEEEcccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEcccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHccEEEEEcccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHcccEEEcccHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEEEccccccccEEEEccHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEccccEEEEccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEEcccccHHHHHHHHHcccHHHHHHHHHcccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEEEcccccHHHHHHHHcccccccccEEEEEEEcccHHHHHHHHHHHHHcccEEEEcHHHHHHHHHccccEEEEEccccccHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHHHcccccccHHHHHHHHHcc //