[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59026.1
DDBJ      :             carbamoyl-phosphate synthase small subunit
Swiss-Prot:             

Homologs  Archaea  59/68 : Bacteria  821/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.23.16c.8.3
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->376 1jdbF PDBj e-137 63.4 %
:RPS:PDB   5->377 1a9xB PDBj 5e-99 61.3 %
:RPS:SCOP  1->152 1a9xB1  c.8.3.1 * 2e-56 56.3 %
:RPS:SCOP  153->378 1a9xB2  c.23.16.1 * 1e-82 65.9 %
:HMM:SCOP  2->152 1a9xB1 c.8.3.1 * 4.9e-54 50.3 %
:HMM:SCOP  153->380 1a9xB2 c.23.16.1 * 4.1e-69 37.3 %
:RPS:PFM   3->133 PF00988 * CPSase_sm_chain 2e-35 51.1 %
:RPS:PFM   204->373 PF00117 * GATase 7e-25 41.7 %
:HMM:PFM   4->133 PF00988 * CPSase_sm_chain 2.7e-57 53.8 130/131  
:HMM:PFM   196->372 PF00117 * GATase 3.5e-49 35.6 177/192  
:BLT:SWISS 1->376 CARA_ECOLI e-136 63.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59026.1 GT:GENE ABA59026.1 GT:PRODUCT carbamoyl-phosphate synthase small subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(2927036..2928181) GB:FROM 2927036 GB:TO 2928181 GB:DIRECTION - GB:PRODUCT carbamoyl-phosphate synthase small subunit GB:PROTEIN_ID ABA59026.1 GB:DB_XREF GI:76884345 InterPro:IPR000991 InterPro:IPR001317 InterPro:IPR002474 InterPro:IPR006220 InterPro:IPR006274 InterPro:IPR011702 LENGTH 381 SQ:AASEQ MRPEALLALEDGSVFRGTAIGCHGQTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHVGNVGTNSEDQESDRVYASGLAIRDYSFAVSNWRAREPLDAFLARHQVVAIADIDTRRLTRRLRQHGALNGCIMAGGGLDEAEALAQARAFPGLKGMDLAQVVTTDASYGWSEGSWRLEQKAFAAGEKVKERFHVVVYDFGVKRNILRMLVDRGCRVTVVPARTSAKEALNLSPDGIVLSNGPGDPDPCGYAITAIQEFLARPIPLFGICLGHQLLALASGATTVKMKFGHHGANHPVQDLATGEVLITSQNHGFAVNEKTLPPCLKPTHRSLFDGTLQGIQDRDKLVLGFQGHPEASPGPRDIAPLFDRFITLMQKAHTQQ GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 1->376|CARA_ECOLI|e-136|63.0|376/382| SEG 115->123|trrltrrlr| SEG 134->147|agggldeaealaqa| BL:PDB:NREP 1 BL:PDB:REP 5->376|1jdbF|e-137|63.4|372/380| RP:PDB:NREP 1 RP:PDB:REP 5->377|1a9xB|5e-99|61.3|372/378| RP:PFM:NREP 2 RP:PFM:REP 3->133|PF00988|2e-35|51.1|131/131|CPSase_sm_chain| RP:PFM:REP 204->373|PF00117|7e-25|41.7|168/185|GATase| HM:PFM:NREP 2 HM:PFM:REP 4->133|PF00988|2.7e-57|53.8|130/131|CPSase_sm_chain| HM:PFM:REP 196->372|PF00117|3.5e-49|35.6|177/192|GATase| GO:PFM:NREP 3 GO:PFM GO:0004086|"GO:carbamoyl-phosphate synthase activity"|PF00988|IPR002474| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00988|IPR002474| GO:PFM GO:0003824|"GO:catalytic activity"|PF00117|IPR000991| RP:SCP:NREP 2 RP:SCP:REP 1->152|1a9xB1|2e-56|56.3|151/151|c.8.3.1| RP:SCP:REP 153->378|1a9xB2|1e-82|65.9|226/228|c.23.16.1| HM:SCP:REP 2->152|1a9xB1|4.9e-54|50.3|151/151|c.8.3.1|1/1|Carbamoyl phosphate synthetase, small subunit N-terminal domain| HM:SCP:REP 153->380|1a9xB2|4.1e-69|37.3|228/0|c.23.16.1|1/1|Class I glutamine amidotransferase-like| OP:NHOMO 2028 OP:NHOMOORG 1071 OP:PATTERN 11-1-11111111111-222222121121222211222221212222211222212--1--111--11 2112311111122222223-22222222222222222212232212222222222122112211122232123332221-1122112222211222-1111111121122--------------122222222222222222222222222222222222222221222222222222222223221121123333333333233333333333333333334433333333211111111111111111111121411432223322111222311112221222111111111111111111111111111111111111124-23---111-1-1333322222-3--2223244322111222222-11222222211111221112111111111111111111-22222222112122222222222222212222222222222222222222122221111111111---------------11112121122222222222232222222222222222222222222222222222212222222222222222222222212332111111111122222222222223122222211111111211111112222222222122212221222211111122111121211222211111122222222222222222-22222222222222222222222222222222222222222222222222221222222222222222222122222222222---1-11----1--122222322322222222223222222222111111111212222222222212222222222222221121332222--------------------------------------2--21222221 11--113-311-1232234222322223323332223333332222332322223322333332222212332322323322222222-22222232223221443-22143322322121222432216H2-3221122212211221222122222213-13211211611412221I1222242533132243222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 380 STR:RPRED 99.7 SQ:SECSTR ccE#EEEEETTccEEEEEEccccEEEEEEEEEEcccccHHHHHTcGGGcTEEEEEccccccTTcccGGGcccccccccEEEccccccccccTTccccHHHHHHHTTcEEEEcccHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHccccTTcccHHHHcccccEEEccccccTTTcccccccGGGccEEEEEEEccccHHHHHHHHHTTEEEEEEETTccHHHHHTTcccEEEEcccccccTTcHHHHHHHHHHTTTccccEEEEHHHHHHHHHTTccEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEccTTccTTEEEEEEETTTccEEEEEEccccEEEEcccTTccccccTTTHHHHHHHHHHHHHHHHH DISOP:02AL 1-2, 379-381| PSIPRED cccccEEEEEcccEEEEEEEccccEEEEEEEEEcccccccEEccccccccEEEEEEcccccccccccccccccccEEEEEEEEEcccccccccccccHHHHHHHcccEEEccccHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHcccccccccEEEEcccccEEcccccccccccccccccccccccEEEEEEccHHHHHHHHHHHcccEEEEEEccccHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHccEEEEccEEEEcccEEEEEEccccEEEEEEcccEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcc //