[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA59036.1
DDBJ      :             thioredoxin
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  880/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:110 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->110 3dxbD PDBj 1e-41 67.6 %
:RPS:PDB   8->110 2eiqA PDBj 2e-27 66.0 %
:RPS:SCOP  8->110 2b5eA3  c.47.1.2 * 5e-26 7.9 %
:HMM:SCOP  7->112 2trcP_ c.47.1.6 * 2.3e-37 47.1 %
:RPS:PFM   6->106 PF00085 * Thioredoxin 5e-29 48.5 %
:HMM:PFM   8->108 PF00085 * Thioredoxin 1.5e-36 42.6 101/104  
:BLT:SWISS 8->110 THIO_PSEAE 3e-48 76.7 %
:PROS 27->45|PS00194|THIOREDOXIN_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA59036.1 GT:GENE ABA59036.1 GT:PRODUCT thioredoxin GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 2937030..2937362 GB:FROM 2937030 GB:TO 2937362 GB:DIRECTION + GB:PRODUCT thioredoxin GB:PROTEIN_ID ABA59036.1 GB:DB_XREF GI:76884355 InterPro:IPR005746 InterPro:IPR006662 InterPro:IPR006663 LENGTH 110 SQ:AASEQ MTDRIIPVTVTDATFEEEVLKSEQPALVDYWAEWCGPCKTVAPILEEIANDYQGKLKICKLNIDENPSTPPRYGIRGIPTLMLFKNGNVEATKVGALSKSQLSAFIDSNL GT:EXON 1|1-110:0| BL:SWS:NREP 1 BL:SWS:REP 8->110|THIO_PSEAE|3e-48|76.7|103/108| PROS 27->45|PS00194|THIOREDOXIN_1|PDOC00172| BL:PDB:NREP 1 BL:PDB:REP 1->110|3dxbD|1e-41|67.6|108/216| RP:PDB:NREP 1 RP:PDB:REP 8->110|2eiqA|2e-27|66.0|103/107| RP:PFM:NREP 1 RP:PFM:REP 6->106|PF00085|5e-29|48.5|101/103|Thioredoxin| HM:PFM:NREP 1 HM:PFM:REP 8->108|PF00085|1.5e-36|42.6|101/104|Thioredoxin| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 8->110|2b5eA3|5e-26|7.9|101/125|c.47.1.2| HM:SCP:REP 7->112|2trcP_|2.3e-37|47.1|104/0|c.47.1.6|1/1|Thioredoxin-like| OP:NHOMO 2769 OP:NHOMOORG 1112 OP:PATTERN -----1232222222211-----225323-22-----1-----2321324332--------111--22 1123522222222221123-23112222222232222274322222123211233231--3321332545311111111112311222555415331--21132132322111111111111111331332333334223311231546666734332222234441787611111111111122222--221111111121111211111111111111112112222223211111111111111111111112122131113322123223321111111111211111111111111111111111111211111111111222222222232413221221211123231154231112422221-12212322511111323342223233222222222223-24323432342122222222224222232222222222322222222322222321111111111111111111111111111112333122222222233412223322222223222222211332333433233321116211221111111112223242412332211111122233211444457222111111111111222222221233442212325321222222121222212112111-1222411111123222332222222122-222222222222222222322233111222222222222222222222222212222222222221111222222222324321111111111111112121212222322222333333333222222222222242224222222222222334332222222235122111111111111212-1-11---1--11----1-1--111----------221 2223563-31217754745376485853333234321333133334236697674544544443323233232233231331111133-64674545445115464-3CA9453364414365665283Eh5-6552511A35551542343262633446448521A5639A666776o34569BCGO5D97745662 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 110 STR:RPRED 100.0 SQ:SECSTR cTcccEccccTTTEEEcccccTTcccEEEEEcTTcccHHHHHHHHHHHHHHHHHccTTcccEEEEccccccHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHTTccHHHHc DISOP:02AL 1-3| PSIPRED cccccEEEEEcHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHcccccccEEEEEEccEEEEEEEccccHHHHHHHHHHcc //